UFO01995.5prime Sequence
733 bp (639 high quality bases) assembled on 2008-11-05
> UFO01995.5prime
CAGTCGACATGACGCTCGAACAGCTGTCCGCAAATAAGTGCTTCGAGGGC
GAGCAACGCGTGTATCGCCATCGCTCGGACACCTTGAAGTGCGACATGAC
CTTTGGCGTCTTCCTGCCGCCGGCCGCTTTGGAGGGTAAACCGTGTCCGG
TGCTGTTCTTCCTCAGCGGACTGACCTGCACGCATGAGAACTTCATCCAG
AAGAGCGGATTCCAGCAGCACGCCGCCCGCCACAACCTGATCGTCGTCAA
TCCGGACACTTCGCCCAGGGGCGTGGAAATTGCCGGCCAAGATGATGCAT
ACGACTTTGGAAGCGGGGCTGGATTCTATGTGGATGCAAAGGAGGAGCCG
TGGTCGAAGCACTACAAGATGTACAGCTATGTGACCCAGGAGCTGGTGGA
TGTGGTCAATGCCAATCTGCCCGTGGTTCCCGGTAAACGCGGTATATTCG
GCCACAGTATGGGCGGCCACGGAGCCCTGATCTGCGCGCTTAAGAATCCC
GGGCTGTACCAGTCGGTGTCCGCTTTTGCGCCGATTGCCAATCCCACCGA
GTGCCCGTGGGGCAAGAAGGCCTTTGCCGGCTATCTGGGCTCACGGTGCT
GGTCCGTTGGCTCAACTCAGTTCCAAGCCAATCGCGACTGGGACGGGGAG
AGCTCAATACCAGCACTTACCTGCATCCGCGATCGTTATTGGGCAGAAAA
AATGTAGAAGACGTTTGACTGTTGCGTGTTTTA
UFO01995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4390-RA | 1006 | CG4390-RA | 51..636 | 7..592 | 2930 | 100 | Plus |
| CG4390-RB | 1141 | CG4390-RB | 186..771 | 7..592 | 2930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20056788..20057373 | 592..7 | 2930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:10:14 has no hits.
UFO01995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:55 Download gff for
UFO01995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4390-RB | 195..786 | 1..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:53 Download gff for
UFO01995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4390-RB | 195..786 | 1..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:13 Download gff for
UFO01995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4390-RB | 180..771 | 1..592 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:13 Download gff for
UFO01995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20056788..20057377 | 1..592 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:53 Download gff for
UFO01995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15882510..15883099 | 1..592 | 99 | | Minus |
