UFO02007.5prime Sequence
916 bp (33 high quality bases) assembled on 2008-12-15
> UFO02007.5prime
CAATCCACTTGGTCGGAATAACGCCCGCAGAGAAGAGAGCCCTGATAACG
CGCATTCTGCAGGAGACTCTCGGCGATGACAAGCTGACCGTTATCCTGGC
GGATCGCGATCTAAAGATCTACTGGGGAACGGCCACGACGGGCATTCCAC
TTGTCGCCTATTTCGTGCCCATGTCAAATATTGCCGATTTCCTGAAGGCA
GGATGCCAAGTGACCATCCTGTTCGCCGATCTCCATGCCTATCTGGACAA
CATGAAGGCACCGTGGTCTCTCCTGGAGCTGCGAACCAAGTACTACGAAC
AGGTGTCAAGGCCATGTTGAGCTCCATCGGCGTTCCGCTGGAGAAACTGA
AGTTCGTCAAGGGCAGCGACTATCAGCTGTCCAAGGAGTACACCCTGGAT
GTATACAAGCTCAGCTCCGTGGTCACGCGACACGATGCCAAGAAGGCGGG
CGCAAAGGTGGTCAGACAGGTGGAGTACCCACTGCTCTCCGGTTTGCTTT
ATCCTGGTCTGCAGGCTCTGGACGAGGAGTACCTCAGGGTGGACGCACAA
TTCGGTGGCGTGGATCACCGCAAGATCTTTACCTTCTCAAAGAAATATCT
GCCACATTTGGGCTACAAAGAGCGCATTCTCTTCATGAGTCCCATGGATC
CCGGCTTGTCTGGTGTGAAGATGTCCTCTTCCGAGGAGGACTCAAAGATC
GATCTTCTGGACTCCCCGGCCAACGTGAAGAATAATCTGAGAACGCTTTC
TGTGAATCGGGAAACATTGCCGACACTGGCTGCTGTCCTTCGTGATGCAC
GTCCTGTTCTCGCTGTTCACGGAAGGCGAAGCTTCGAGGTTAGCACTAGT
CGTAGTATGGTTGCTATGTTACCTTCCTGAGTTCCAGGATCTGCAGAGTA
CACGCAGTATGACAAC
UFO02007.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-tyr-RA | 1771 | CG4561-RA | 61..954 | 10..897 | 3480 | 93.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16418604..16419242 | 647..10 | 2695 | 95.1 | Minus |
| 3L | 28110227 | 3L | 16418305..16418540 | 880..649 | 665 | 89.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:18 has no hits.
UFO02007.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:19:39 Download gff for
UFO02007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-RA | 54..943 | 10..893 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:06 Download gff for
UFO02007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-RA | 61..950 | 10..893 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:24 Download gff for
UFO02007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-RA | 61..950 | 10..893 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:24 Download gff for
UFO02007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16418604..16419242 | 10..647 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:06 Download gff for
UFO02007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16411704..16412342 | 10..647 | 95 | | Minus |
