UFO02016.5prime Sequence
402 bp (14 high quality bases) assembled on 2008-12-15
> UFO02016.5prime
CAATCCACATGCGCAGCGGCTCGCCCAGCGGCTGCGGCTCCCAGACGGAA
GAGGGCATCGATTGCTCTTATCACCATCAACCGCAACGGGAACCCCAGGA
ATTGGACCAACAGCTGCACACTCCCACGCATGCTCATGCCGCGGTGCCAA
CTGCCACATCGGAGGAAATCCTGGCGGAGTACGGCGTCCCCTTGATTCTA
CTCGAGTGCAATTCCCACGTGGCCCAACTGCTGACAATATTGCGCGACAA
GAACACCCCGCGCAGTGACTTCAAGTTCTATGCCGACCGTCTCATCCGGC
TGGTCATCGAGGAGTCGCTCAACCAGCTGCCCTACACCCATTGCGATGTG
GAGACGCCCACCGGTGCGATTTACGAGGGACTGAAGTATCGCTCCGGCAA
CT
UFO02016.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5537-RC | 1191 | CG5537-RC | 106..500 | 8..402 | 1450 | 91.1 | Plus |
CG5537-RB | 1045 | CG5537-RB | 106..500 | 8..402 | 1450 | 91.1 | Plus |
CG5537-RA | 1106 | CG5537-RA | 106..500 | 8..402 | 1450 | 91.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5811386..5811537 | 251..402 | 730 | 98.7 | Plus |
3L | 28110227 | 3L | 5811078..5811321 | 8..251 | 725 | 86.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:57 has no hits.
UFO02016.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:19:22 Download gff for
UFO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5537-RA | 106..500 | 8..402 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:24 Download gff for
UFO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5537-RA | 106..500 | 8..402 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:22 Download gff for
UFO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5537-RA | 106..500 | 8..402 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:22 Download gff for
UFO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5811386..5811537 | 251..402 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:24 Download gff for
UFO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5804486..5804637 | 251..402 | 98 | | Plus |