UFO02029.5prime Sequence
1125 bp (988 high quality bases) assembled on 2008-12-15
> UFO02029.5prime
CAGTCGACATGGAGACGCTCCTGGAGCAACAGCGGCGCCTACACGAGGAG
CGCGAGCGCCTGGTCAAACTGATGGTGGACGAGCATGCGACCAAAAAGCC
GGGCGAAAAGGAGCGCATCCATTCGGAGCACCGGCTTAAATACCTCATGG
AACTGCATCACAACTCTACGTCCCAGCTACGCGATCTCTACGAGGACAAG
GACAATGAACGAAAGGCGGAGATTGCCGCTCTTTCGGGGCCCAACGAGTT
CAATGAGTTCTACGCCCGCCTCAAGCAAATCAAGCAGTTCTACAAGTCCC
ATCCGGCGGAGGTCAGCGTGCCGCTGTCCGTCGAGTTCGACGAGATGATT
CGGGTGTACAACAATCCGGACGACATGAGTGCCCTAGTGGAGTTCACTGA
CGAGGAGGGCGGCGGTCGCTATCTGGACCTCAACGAGTGCTACGAGCTGT
ACCTCAACTTGCGGTCGGTGGAGAAACTGGACTATATCACTTACCTTATG
TCCTTTGACCACGTCTTCGATATTCCGAGAGAGCGCAAGAACCGCGAGTA
CCGCATATACATAGAGACCCTCAACGACTACCTGCACCACTTCATCCTCC
GAATCCAGCCCTTGCTCGACCTGGAGGGCGAACTGCTAAAGGTGGAACTT
GACTTCCAGCGCCAGTGGCTGATGGGCACATTTCCGGGTTTTTCGATTAA
GGAAACTGAGTCGGCGTTGGCCAACACCGGCGCCCACCTTGATCTATCCG
CCTTCTCCAGCTGGGAGGAGCTGGCCTCGCTAGGACTGGATCGTCTAAAG
TCGGCTTTGGTGGCTCTGGGTCTTAAGTGCGGCGGCACCCTGGAGGAGCG
AGCACAGCGTTTATTCTCTACAAAAGGTAAAGCACCTTGGATCCCGCACT
GATGGCCAAGAAGCCCAGCGCAAAGACTGCTAGTGCCCAGTCACGGGAGC
ACGAACGGCACAAGGAGATTGCCAGCTAGAGGCTCTTGCTTCACAAATAC
GCGGATCTTGTTGTCTGACAGAGAGCGGCTACAGAGAAATGTGCAGAGAA
AACAGGCTCGGAACTGGTGGCGAGCGGTACGATAGCGATTGTGGAAGGCA
GCGGTCGACCACGAAAATGATCCCG
UFO02029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-RA | 1859 | CG2925-RA | 127..1247 | 8..1125 | 5200 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5590250..5591333 | 1089..8 | 4965 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:37:09 has no hits.
UFO02029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:52 Download gff for
UFO02029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 119..1227 | 1..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:55 Download gff for
UFO02029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 120..1228 | 1..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:09 Download gff for
UFO02029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 120..1228 | 1..1107 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:09 Download gff for
UFO02029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5590232..5591336 | 1..1107 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:55 Download gff for
UFO02029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1415954..1417058 | 1..1107 | 98 | | Minus |
