UFO02038.5prime Sequence
1135 bp (1011 high quality bases) assembled on 2008-12-15
> UFO02038.5prime
CAGTCGACATGAGCGGTTCCGTATTGAGTTTGGCGCGTCCTGCAGCAGCC
ACAAATGGCCATAATCTGCTGACCAAACAGCTGAATTGCAATGGCAATGG
CACCACCGGTGGCGCGGCGAAAACCACTGTGGCCTCGGCCATAACACCGC
CCAAGCAGCCCCAGTTGGCGGCCAAGGTCATCCAGCAGTCGCAGATCGTC
TGTTTCGATGTGGACTCCACGGTGATTTGCGAGGAGGGCATCGACGAACT
GGCCGAATATTGTGGCAAGGGGAGCGAGGTGGCTCGCGTTACCAAGGAGG
CGATGGGCGGTGCCATGACCTTCCAGGATGCCCTCAAAATTCGCTTGAAC
ATCATACGGCCGACACAGCAGCAAGTGAGGGATTTCATCCAGGAGCGACC
CAGTACACTGAGCAAAAACGTGAAGCGTTTCGTCAGCCATTTGAAGGCGG
AGGGAAAACAGGTTTACTTGATCTCCGGCGGATTCGATTGCCTAATTGCG
CCCGTGGCCAATGAATTGGGTATTCCCCTGAAAAACGTCTATGCCAACAA
GATGCTGTTCGATTATTTGGGCGAATACGATAGCTTTGATATCAACCAGC
CCACTTCGCGTTCCGGCGGAAAGGCAGAGGCTATCGCCCTGATAAGGAAG
GAGAATAGCGACGATTCCCTAATCACCATGATCGGCGATGGAGCCACCGA
TCTGGAGGCCGTACCGCCAGCCAACTACTTTATAGGTTTCGGTGGCAATG
TCGTGCGGCCGGAGGTCTATCGCCGTGCACAGTATTACGTAACGGATTTT
GAGCAGCTGATGGGGCAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATCCTCACCAATAAA
AACGGCCGGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTTATCAACCGAGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCCATCGCAGTTACTTTTGTAATTCATAT
AAGCATTTCTTGCGCACTCTGGAGCATCTAAAACG
UFO02038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-RA | 1529 | CG3705-RA | 292..1107 | 3..818 | 4065 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9423544..9424359 | 3..818 | 4065 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:42:18 has no hits.
UFO02038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:43 Download gff for
UFO02038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 290..1111 | 1..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:38 Download gff for
UFO02038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 290..1111 | 1..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:04 Download gff for
UFO02038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 290..1111 | 1..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:04 Download gff for
UFO02038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9423542..9424363 | 1..822 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:38 Download gff for
UFO02038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9416642..9417463 | 1..822 | 99 | == | Plus |
