UFO02054.5prime Sequence
1128 bp (1043 high quality bases) assembled on 2008-12-15
> UFO02054.5prime
CAGTCGACATGTTGAGCCTGCGAAGTGTATTAAAACACTGCCTTTCGGCA
AAGAAAACGTGTAGCAGAAACATCTCCGCGCTGTACATAACCGGCGATAA
AGCGAACGAAAACTATGTGACTCTGCAGCCGTACATGGACTTCAATAAAA
CCTTTGGAGAGCGGCAATTTTTGGAGCAGAGCATCTCCAGCCGGGGATTG
GACATTCGTTTGGAAACTGTGCTCAGCAAGTACGAGAAGTATAAAACACA
TCACGCTCAGCTGTCCAAGGTGGCGGAGGAACGCGAAAGGGTGACCAAGC
GCCTAAAGGAGCTAACGAAATCTGGTAGTAGTGCGGTTCAGCTGGAGGAG
TTGAAAGAGCATGGGAAATCGTTGCGCAATGAGCTAAAGGCTCTGAAGCA
GACTCTCTATCCCATAGAGGATGACTTTATTCATGACTATCTGCACTTGC
CCAACCTTCTGCATGTCCAGTGCCCTGTTGGAGGGGAGGAAAAGCTTCTC
TATCGTCATGGGATACCCAAATCAGAAAATAAGACTACATCCCACTTGGC
ACGCCAGGAACTTGTACATTTTGTAGACAACAATCGTTACTACTTGATGG
AGCAGGCTGCTCTTTTTGACGTAAATGCCATGCAATCCCTGGCCCGCTAT
TTCGTCAACCACGGGCACTTCATTCAAACCGCCAATCCGGACTTTGTGCG
TTGCGTTCTCCTGGAAGCAAATGCGACACCCTTATCCGACTATCATCTGG
TTCAGGAAGAGCACCTGCAAAACAAGATCAATACCGCCTATTTGACTGGA
GGTGCGTCCTTCGAGAGCTACCTTGGTGCCATGACCAAGCTGTGCGTGTA
TCCCTCGGTGCTGCCCCTTCGGTATGTCTGCTGTGGTCGGAGCTACAACA
GAGCGGAAGCGGATTTGTATGGGCCCATTCCTAGTCTTTATACGGCGACA
CAAACGAATGCGTACAAATCTTTGTGGCAACGCAAACGGACAACGAAGCG
GACTCCCAACTAGAGCATATTTCTCATCTGGCAACTGATTTCTACAAAGG
CACTGGACAAAACATCAGATTTCTTATGCCACAGACAGCAGAATCTAAAC
TCGGCGGGAAGATTCGGCAATCATCGAG
UFO02054.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Slimp-RA | 1532 | CG31133-RA | 67..1156 | 9..1098 | 5225 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24147860..24148901 | 1049..9 | 5100 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:58 has no hits.
UFO02054.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:18:53 Download gff for
UFO02054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31133-RA | 23..1124 | 9..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:26 Download gff for
UFO02054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Slimp-RA | 67..1168 | 9..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:52 Download gff for
UFO02054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Slimp-RA | 67..1168 | 9..1112 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:52 Download gff for
UFO02054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24147858..24148901 | 9..1052 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:26 Download gff for
UFO02054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19973580..19974623 | 9..1052 | 99 | | Minus |
