UFO02065.5prime Sequence
1102 bp (1001 high quality bases) assembled on 2008-12-15
> UFO02065.5prime
CAGTCGACATGCAGCGAGTCCAGGCCGACCAAAAGCCAGCCAGAATGCAC
CAGCATGCACATACGCATTCGCACGCGCACAGTTTGCAGCATGCGGAGGA
GAAGGAGCACAATAGCAATGAGATGACGACCAACTTGTCGTCGACTGGCC
GAATTGCGGCCAGTAGCAGTGCCACGCCCAGCGCAGCAGCGGGAGGCGGG
GCCAGCGGAGCACCCACTCCGCCCAAGAGTCTGGCGCTCAATCAGAACCA
TCACTATGCACCCGGTTCGGATACATCCGGGGAACAGGAGGAGGAGCTGC
TGGACTCGCGATACGAGTGCGCCATTTGCATCGATTGGCTAAATGAGCCG
GTGTTGACGTCGTGCGGCCATCGATTTTGTCGCAGCTGCCTCACCGCCTG
GATGCAAAAGAACAATCAATGCTGCCCCATGGACAACAAGCGTCTGTCCG
CCGAGCACGACATCTTTCCGGACAACTACACGCGCCGCGAGATCGAGCAA
CTCAAGCGAGATTGCCCCAACTCCTCGCTGGGCTGTTCGGTGGTTGCCTC
GCCCATCGAACTGCATCGCCATCTGCCCAGTTGTCCCTATCGGCGGCAGC
AGGAGCCGCAGGAGGAGAAGTGCCCGTTTGCCAAGATCAAGTGCGATTTT
GTGGGCCGACCAGAGACCAATCAGTTGGAGGAGCACCTCAAGGCCGACAT
GCCGCATCACATGCAGCTGATGCTGCAGGCATTCCAGCAGACAGCCATTG
CCACCTGGCAGCCACACAAGCCCAGCACAAGTGGCGCCGCCGTGGAGAAT
GGTCATGGCCAGCAGCAGCTGCCGCCACCGCCGCAATATGCCAATGGTGT
GGATGAGCAGATTGTGCAAACGATGTACCAGAGAATTGTGGATTTTGGAA
CAGCGGACACGCGAGCAGGAGACGCGACTGGAGAATATGCAAAGCAGCTG
CGTCTGGCACGCCAGCAGCGCCCGTTGATCCGCGCTACAGCATGCACGAT
TGGTGTGGCGCATCGAGCAGCTGGCGCTGTGCTCGGCCTGCGCCAATGCA
ACAATCAGGTACTCGCCACGATGCCTACACCCCTCGCCGCATGCTACAGT
TC
UFO02065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Traf6-RA | 2788 | CG10961-RA | 126..1224 | 9..1098 | 4985 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8156244..8157261 | 1024..9 | 4820 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:10 has no hits.
UFO02065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:18:40 Download gff for
UFO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 98..1123 | 1..1024 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:01 Download gff for
UFO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..1143 | 1..1024 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:19 Download gff for
UFO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..1143 | 1..1024 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:19 Download gff for
UFO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8156244..8157269 | 1..1024 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:01 Download gff for
UFO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8050277..8051302 | 1..1024 | 99 | | Minus |
