UFO02086.5prime Sequence
1152 bp (1013 high quality bases) assembled on 2008-12-15
> UFO02086.5prime
CAGTCGACATGCAGGAACAAAGTCCCGAGCTGTACGAGGAGGTGAAGCTC
TTCCGTAACGCCCGCGAGCGCGAGAAGTACGACAACATGGCCGATCTATA
CGCAATCATCAACACCATCCAGCAGCTGGAGAAGGCCTACATCCGCGACT
GCATTACGCCGCAGGAATACACGGCCGCCTGCTCCAAATACCTGGTGCAG
TACAAGGTGGCCTTTAAGCAGGTGCAGTGCGACGAATTCCCCTCGGTGGA
GACGTTCGTTAAGAAATTCCGGCTGGACTGCCCTGCTGCGCTGGAGCGGA
TCCGCGAGGACCGACCCATCACCATACGCGACGATAAGGGCAACACCTCC
AAATGCATCGCCGAGATCGTGTCGCTGTTCATCACAATCATGGACAAGCT
ACGCCTGCAGATCAACACCATGGACGCCCTACAGCCGGACGTCAAAGACC
TGGCTGACAACATGAATCGCCTGTCCCTCATTCCCGAGGACTTCGACGCC
AAGCTGAAGGTGGAGAAGTGGCTGGGCAGCCTGAACGAGATGCAGGCCTC
CGACGAGTTGAGCGAGGGCCAGGTCCGCCAGTTCCTCTTCGACCTGGAGT
CGGCGTACGCGGACTTCAACAAGCTGCTGCACAGCCAGGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TTAAAATTGCCCATGTGAAAAACGGGGGCGAAGAGTGTCCATATGCACGG
TTTAATCAACTGGTGAACTCACCCAGATGCTGAACGAAAACATATCTCAT
AACCCGTTAGGAATGCAGTTCCGTAACGCCACTTGCAAATATGGTGTGAA
AA
UFO02086.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps28-RB | 1173 | CG12770-RB | 88..721 | 5..638 | 3155 | 99.8 | Plus |
| Vps28-RA | 805 | CG12770-RA | 88..721 | 5..638 | 3155 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8079321..8079954 | 638..5 | 3155 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:10:49 has no hits.
UFO02086.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:18:06 Download gff for
UFO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps28-RA | 77..725 | 1..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:15 Download gff for
UFO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps28-RA | 83..731 | 1..651 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:30 Download gff for
UFO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps28-RA | 83..731 | 1..651 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:30 Download gff for
UFO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8079311..8079955 | 1..651 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:15 Download gff for
UFO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3966816..3967460 | 1..651 | 98 | | Minus |
