UFO02091.5prime Sequence
1103 bp (999 high quality bases) assembled on 2008-12-15
> UFO02091.5prime
CAGTCGACATGCCAATCCTGCCAATACTCATTGGGATACTACACTTGTCC
CTGGCGGAGGACGCCAAGCACCTCGATGGGTTCTCCCTGCCCAGCCTGCC
GTCGGAACACCTCATCCGGTACCTGAACACCTTTCCCAAGCTGAAACAAC
AGCTGCCCACGAATCTCACCGGCAAGGGCACCATTTCATCCGCCTGCTGG
GGCCACGAGCGGGACTGCACGCCAGCTGGCCGCTTCCAGACGCCCCAGTG
CCCTGGGGAACATACCGGCTGGGCCAGGAGCAAGGAGGCACAGGTTAGGA
CCTTCTACAACCAGGCCGACTTCGGGTACATCCAGGAGCAGCTCTCCCAA
CTGACGCCGCAATGCGTGCCAACCTATTTGGGCGATTCCTCGCTAGAGTG
CACGCACTACCTGCGCTTTTGTCGTGGGCGGAATCTTCTCTTCGACTTTC
GGGGCTTGGAGCAGCGGGAAGAGCGCATTCGTTACCATATGGATGTGCTG
GGACCAGGACAGCTGCTGGGGCACTGCAAGTTGAATCGGACTCGACTGTC
GGGCGAAATGGAGCACATTGGATCGGCTCTGCAGTCCTGGGGTCCGGAGT
TGCGTAATTTTGATGTCTTACCACATCCCGTTCTGGAGAGCGGTCTCTGC
GATGTGGTGGTGAATACGCCCACTTTCATCATGAAAATCGATGCCACGTA
CAACATGTATCATCATTTCTGCGACTTCTTCAACCTGTATGCCTCGCTCT
TTGTCAACCAGTCGCATCCGGCGGCCTTCAACACGGATGTGCAGATACTT
ATATGGGAGACCTATCCGTACGATTCGCCCTTCAGGACACATTTAACGCC
TTCTCGCAACGACCAGTATGGACACTCAGCGATGTGAGGGCAAGCGGGTA
TGCTTCAGAACGTTGTGCTGCGCTGCTGCCCAGGATGATCTTTGCTTATT
CTACAATACACCCATAATCCAGCTGCTCGAATAGTGACTCTTCCGCGCCT
TCTCGAGTTCATTCTGCACCGCCTGCGATCCTACAAGCCGCCCCAGCAAG
ATCAGAATACATTCTATCGCGTCGCACAAGTACCGCAGTGCTTAATGAAC
AAC
UFO02091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eogt-RA | 1869 | CG9867-RA | 238..1347 | 9..1099 | 5060 | 98 | Plus |
| Eogt-RB | 1806 | CG9867-RB | 175..1284 | 9..1099 | 5060 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2381334..2382296 | 9..966 | 4550 | 99.4 | Plus |
| 2L | 23513712 | 2L | 2382356..2382472 | 972..1079 | 190 | 91.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:49:48 has no hits.
UFO02091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:18:25 Download gff for
UFO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9867-RA | 195..1304 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:09 Download gff for
UFO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eogt-RB | 175..1284 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:13 Download gff for
UFO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eogt-RB | 175..1284 | 9..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:13 Download gff for
UFO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2381334..2382296 | 9..966 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:09 Download gff for
UFO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2381334..2382296 | 9..966 | 99 | -> | Plus |
