UFO02092.5prime Sequence
1122 bp (1008 high quality bases) assembled on 2008-12-15
> UFO02092.5prime
CAGTCGACATGTCTGCGCTGTTCCGTCTGACCAACCGCGCCGTGGCGCTG
CAGCGTTCCCTGGTCGCCAACCAGGCGGCAGTGGTGCGGGCAATCAACAC
GTCGCCGAAGAAGGATGAGACCATCACGGCCCCCACTTCACTTACGACCG
AGGACTTTGCCAATCCGAGTCCCAAGAACTGGCAGAGCTACGGATTCGAC
TACAAGGACCAGGTGGAGGATCGCAAGGCCACCAAGTCGACGTTCTTCGT
TACGGTGACACTGTGCCTGGTGTGGGGCAGCTTCTACTGGGCCTACCTGC
CCGACACTCAGTTCCGCAACTGGGCCCAGCGTGAGGGCTTCTTGGAGCTG
CGTCGCCGCGAACTGGCCGGCGTGGATTTGGTCAGCCCCAACTACGTGGA
CCCCGCCAGCATTACACTGCCCTCGGACGAGGATCTGGGCGACACCGAGA
TCATCATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGAAACTCA
CCCAGGGATTGGCTGAGACGAAAACATATTTCTCAATAAACCCTTTAGGG
AAATAGCAGGTTTCACCGTAACACGCCACATCTGCGAATATATGTGTAGA
ACTGCGGAATCGTCTGCTATTCACTCCAGAGCGATGAAACGTTCAGTTTG
CTCATGAAACCGGTGTAACAGGGTGAACATATCAATCACCAGGCTCACGG
TCTTCATTGCATCGAATCCGAT
UFO02092.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NP15.6-RA | 648 | CG6008-RA | 81..530 | 9..458 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19027448..19027897 | 9..458 | 2250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:01:11 has no hits.
UFO02092.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:18:24 Download gff for
UFO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 90..554 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:16 Download gff for
UFO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 90..554 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:00 Download gff for
UFO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NP15.6-RA | 74..538 | 1..467 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:00 Download gff for
UFO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19027441..19027897 | 1..458 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:16 Download gff for
UFO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14853163..14853619 | 1..458 | 99 | == | Plus |
