UFO02096.5prime Sequence
1089 bp (999 high quality bases) assembled on 2008-12-15
> UFO02096.5prime
CAGTCGACATGTACAGGTCTCTGCTGCACAACGTTTCACTCAAGGCGACA
TCAAGGATTATCAGGCGCAGCGTGAGCAGCCAGGCAAAAGGAGCCAGCGG
AAAGCGCAAACAAAAAGCGAAGGAGATGGAGTCGAGCCACGATCGGAATA
GACGCTGGACGTCATTGGGGAATCAGGCTGAGGGTCGAGACCCGCACAAG
TGCTCCTCCTTCAAGGTTGTCTCATATAACATCCTGGCCCAGGATCTGCT
TCTGGAGCACCTCTTCCTGTACGTGGGAATCCCGCATGAGTTCCTCAGCT
GGCAACGCCGCCAGCAGAACCTTCTCAGGGAACTGCTCAAACTGGATCCG
GACATACTGTGCCTGCAGGAGATGCAGTTCGACCACCTTCCAGTGCTCGT
CCAACGACTGCGTATGGGCAACGGCAAGAAGTTGGCTTATGTGTACAAAA
AGAAGACCGGCTGTCGAACGGACGGATGCGCTATTGTCTACGACTCCTCA
AAGTTTGAGTTGCTAGACCACCAAGCAGTGGAGCTGTACGACCAGGCGGT
GGCTCTACTCAATCGCGACAATGTGGCCTTGTTTGCCAGGTTCCGATTCA
AAAAGCAGCAGGAGCAGCAGAAGGAATTCGTGGTCGCCACCACGCACTTG
CTGTTCAACACGAAACGGAGCGATGTCCGTTGCGCCCAGGTGGAAAGAAT
TTTGGAGGAGCTGCAGTCGTTCTCCACCGACACACCTATCGTCCTGACTG
GTGACTTTAACAGTCTGCCCGACTCCTCGCCTATTGAATTCCTCGTTGGC
AAGAATGGGGATGTGGATTCCACAGCTTGCCCAGAACCCCTGCATTTCGA
GATCATCGATTCGGGCGAAGTACTGCCTCCACATACCAGAACGAATGGGT
TATCGTGACTACATCCTGCGCTCGCTAGGATCGCGAGCAGGCACAGCTCT
TGCCTCTCAGCGTCTACTCACTGCCCTCAATCACGGTGCATCGGGGCGGG
ACAGATCCCCATACGTCTGGGTCGATCCTACGGCTTGGGGTGCAGTATCA
CGTGTCGCAGCTTTCTAGACATTCGTACGCCGGGTCCAG
UFO02096.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| angel-RA | 1230 | CG12273-RA | 116..1166 | 9..1048 | 4940 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23694118..23695126 | 9..1011 | 4780 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 21:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 3273..3422 | 372..532 | 120 | 58.4 | Plus |
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 5557..5620 | 372..435 | 113 | 64.1 | Plus |
UFO02096.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:18:10 Download gff for
UFO02096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| angel-RA | 113..1150 | 1..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:21 Download gff for
UFO02096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| angel-RA | 108..1145 | 1..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:57 Download gff for
UFO02096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| angel-RA | 108..1145 | 1..1027 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:57 Download gff for
UFO02096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23694110..23695147 | 1..1027 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:21 Download gff for
UFO02096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19581633..19582670 | 1..1027 | 98 | | Plus |
