UFO02108.5prime Sequence
1147 bp (1050 high quality bases) assembled on 2008-12-21
> UFO02108.5prime
CAGTCGACATGAAGCTATTGGTAGTTTTCTTGGGTCTCACTCTCGTCGCA
GCAGGAAGTGCTAAGAAGGATTCCGAGGATCCTGATCACATTATAACCAA
TGGAAGCCCCGCTTATGAAGGTCAGGCACCCTATGTGGTGGGCATGGCCT
TTGGACAGAGCAACATCTGGTGCAGTGGCACTATTATAGGCGACACCTGG
ATCCTTACATCCGCTCAGTGTCTAACGGGCAGTTCCGGAGTGACCATCTA
CTTTGGAGCCACCCGGCTGAGTCAGGCCCAGTTTACGGTGACAGTGGGAA
CTAGTGAGTACGTTACGGGTAATCAACATCTCGCCCTGGTTCGAGTTCCT
CGAGTCGGATTCAGCAACCGGGTCAACCGGGTGGCCCTTCCATCACTGAG
AAATCGATCCCAGCGCTACGAGAACTGGTGGGCAAATGTCTGTGGATGGG
GAGTGACCACCTTCAGCAATGGACTCACCGATGCGCTGCAATGCGTCGAC
CTTCAGATAATGTCCAATAACGAGTGTATCGCCTTCTACGGATCCACCAC
CGTCTCCGATCAGATCCTGTGCACCCGTACGCCCAGCGGCAGATCCACTT
GCTTTGGCGATGCCGGCAGCCCCCTGATCACCAAACAGGATTCCACCGTG
GTGGGCATTTCCGCATTTGTGGCCTCCAACGGGTGCACCTTGGGATTGCC
CGCTGGATTTGCTAGGATCACCAGCGCACTGGATTGGATCCATCAAAGGA
CTGGAATCGCCTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCCCCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCTGCCACCTCATCGCAGTACTGTGTATTCATTAAGCATTCTG
CGAACATGCAGCATCACAACGGCATGATGACTGATCGCAGCGGCATCAGC
ACCCTTGTCGCCCTGGCGTTAATTTGGCATGGGGAACGGGGGCAAAA
UFO02108.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3088-RA | 836 | CG3088-RA | 20..776 | 8..764 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9600550..9601306 | 764..8 | 3785 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:29 has no hits.
UFO02108.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:07 Download gff for
UFO02108.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3088-RA | 9..768 | 8..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:14 Download gff for
UFO02108.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3088-RA | 20..779 | 8..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:31 Download gff for
UFO02108.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3088-RA | 20..779 | 8..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:31 Download gff for
UFO02108.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9600547..9601306 | 8..768 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:14 Download gff for
UFO02108.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9593647..9594406 | 8..768 | 99 | | Minus |
