UFO02109.5prime Sequence
1127 bp (1022 high quality bases) assembled on 2008-12-21
> UFO02109.5prime
CAGTCGACATGTCCGAGGTCGAAAGAGCTCTGGATGTTCTGCTCCAGGAA
GCGGAGGAGCTGTGCATCGGGAGCAGCGTAGTGGAGCTGGACAGGATTCC
AACCGCCTTGGAGTTTTGTCGGGAATTCTACTCCAAAAACCAGCCGGTGG
TCATTCGCAAGGCACTCAATTGGCCCGCGATTGGCAAATGGACGCCAAAG
TACCTGATCGAGGCTCTCGGGGACAGGAGCGTGGATGTGGCAATCACCCC
GAATGGCTATGCCGACGGCTTGGCCACTCAAAATGGACAGGAGTACTTCG
TTTTGCCGCTGGAGACGAAAATGAAGCTGTCCGAGGTGGTCCGCCGCCTG
GATGATCCCACTGGTGCTGTCCACTACATACAAAAGCAGAACTCTAACCT
CAGTGTGGACCTACCGGAACTGGCTGCTGATCTGCGGGTCAGTGATCTCG
ACTTTGCGCAGCAGTCCTTTAACAAACCGCCTGATGCTGTTAACTTTTGG
CTGGGCGACGAGCGCGCCGTTACCTCCATGCACAAGGATCCATACGAGAA
CGTGTACTGCGTGATATCCGGTCACAAGGACTTCGTTCTCATCCCGCCGC
ACCAGCTTAGCTGCGTACCGCGAGGAATTTACCCTACAGGCGTTTACAAG
ACCTCAGATAGTGGTCAGTTCTACATTGAACCGTTGAGGGATGAGGAAGG
CAGCGATCAGTTCACAGAATGGGGTCAGCGTTGATCCCTTGTCACCCGAC
CTGGCCAAATATCCGGAGTACGCCCGGGCCAAGCCTCTGAAAGTACGTGT
TCACGCGGGAGACATCCTATACCTGCCCAACTACTGGTTCCACCATGTGT
CCCAAAGCCACAAGTGCATCGCCGTGAACTTCTGGTACGATCTGGACTAC
GATAGCCGGTACTGCTACTACCGCATGCTGGAGCAGATGACGTCGCAAGG
AGTGCCGCAGCTTTCTAGACCATTCGTTTGGCGCGCGGCCCAGGTAGTGG
TCATAATCATAATCATAATCATATCAATCACAACTAGCTAGGAGATCTGT
CATGACTATGCTGATTCCCCCCAATTAAAAACGCCCGGCGCAACGACGTC
TGACAACTCCGATGATCTGAGGTCATA
UFO02109.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-RA | 1097 | CG10133-RA | 24..970 | 8..954 | 4690 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13449314..13450260 | 954..8 | 4640 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:27 has no hits.
UFO02109.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:05 Download gff for
UFO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 98..1050 | 1..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:54 Download gff for
UFO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 18..970 | 1..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:25 Download gff for
UFO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 18..970 | 1..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:25 Download gff for
UFO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13449325..13450263 | 1..944 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:54 Download gff for
UFO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13442425..13443363 | 1..944 | 99 | | Minus |
