UFO02115.5prime Sequence
1127 bp (1035 high quality bases) assembled on 2008-12-21
> UFO02115.5prime
CAGTCGACATGCTTGCCAAAAGCAAACCGCTGATTGGCATGTCTCACTTG
CTGCAAAAGCAGGTTTTAGGCTTTCTGCCTCCGTCTTCGTTTCGCCACTT
TAACTCCGAGGGCAATTTGTACTCCCAGGATGGCTGGGAGAGTGGCTATC
CGGCGCCCTTGCTGCCGCGCAAGGACCTAAAGCCGTTGGAGAAGAAAGAC
AGATCAAAGGTATACGATGCCTGTTGGCAAACGACGCGGCGGACCGAATA
CAAGTGCCGTTCGGATCCAGAGTTTCAGATGCACGCCTTTATCGATTCGC
GCAAAAGTTGTTTAGAAGACCCCTGCGCCACCGAGATGTTGGCCATCGAT
CTCACCCACTATAAGCCCTCGGACATGGGCAAACGAAAGTATCCGCGCAC
CTGGTTCGAATGTGTGGTCAAGCGGCGGAAGCGGAAGGCCCACTGCGTCC
CCGTACCGCCACCGATGCCGCGGCGCAAGCGCAAGTCGAAAAAGCCCCGC
TGCCCCGAGGATTTGTGTGTATTGGGCAAACTGGAGCTTAACCTCATCAA
ACCCTGCGTTAAGGAATCATCGAAATGTCCGCGCTTCAGAATGCCCAACT
GCTGTGTGGCCGCCCGCGATCCGCCCAAGTGCCGTCGTCCCTTTAGACGT
TGTGGCCAGAGACCCAAGACCAAGTATCCAAGTTTCTCCGAGTGTCGACG
CGATCCCTTCCCGGATCCTCGACCCATCGAGTGCAACTGCCTGCTCAAGC
CGGCCATCTGCGATATGTGGCGCCACTACCGCCGCCGATTTGGCGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAAATCCTGGTCAT
GACTAGTGCTTGGATTCTCACAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAATTCAGGATGGAGTTCTGAGTCATTACTGATCTATCAACAG
AGTCCAAGCGAGCCTCGATATCAATTACGCCCCGCCTGCACTTTATTCGC
AGTTACTGTTTGTATTCATTTAGCATTCTGCGAACTGGAAGCATCAAACG
GCATGATGTACTTGAATCGCCCAGGCA
UFO02115.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4691-RA | 1158 | CG4691-RA | 205..990 | 9..794 | 3930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14760971..14761756 | 9..794 | 3930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:16:26 has no hits.
UFO02115.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:56 Download gff for
UFO02115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..993 | 9..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:12 Download gff for
UFO02115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..993 | 9..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:29 Download gff for
UFO02115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4691-RA | 205..993 | 9..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:29 Download gff for
UFO02115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14760971..14761759 | 9..798 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:12 Download gff for
UFO02115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14760971..14761759 | 9..798 | 99 | == | Plus |
