UFO02118.5prime Sequence
1148 bp (1017 high quality bases) assembled on 2008-12-21
> UFO02118.5prime
CAGTCGACATGCCCACCAAGAAGTGTTACTGCCCCGTCACTCATGTCATC
TTTGACTGCGATGGAACCTTGATAGATAGCGAAGGCATCTACCTCAAAAC
GGTTCAAGACTTGTTGGCTAAATATGGCAAAACGTACACCAAAGTCGATC
AGACGCAGCATATGGGAATGCCGGTCGGTACATTTTCCCAACACATCGTC
AAGGATCTAAAACTTCCGTTGTCACCTGCGGAATTTCAAAAGGAATTCGA
GGCAGCTGTTGATAAGAGCATGGGAAGTGTGGCTCTGCTGCCAGGGGTCA
GGGATCTGATTCTCCACTTGCACGAATACCGCATACCCTTCTGCATAGCC
ACAAGTTCGTTTAGGAAACTGTTCAAAGTGAAGGCCGAGTCCTTCAAGGA
TATATTCCTGGCCTTTCACCACGTTGTCTGTGGCGATGATCCGGCACTTG
GACCGGGAAGAGGAAAGCCCTACCCAGATATATATCTCCTGGCCGCCTCG
CGATTCAATCCGCCCGCAGATCCCAAAAAGTGTCTTATATTCGAGGATGC
TCCAGTGGGCCTCATAGGCGGAAAGGCAGCGGGATCCCAAGTCATCTTTA
TTCCAACTGATAACGTTTCCAAGCAGCAGAAAAAGGGCGCCACCATGGTT
CTAAAATCGATGGCGGACTTTAAGCCTGAGCTCTTTGGTCTACCACCCTT
TGACACCTGCTCCAAATTCGAGTTTGGCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCACCGAGCGTTCTGAACAAATCCAG
ATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAGCGAGCT
CGATTTCAATTACGCCCGCCCTGCCACTTCATCGCAGTACTGTTGTATTC
ATTAAGCATTCTGCCGACATCAGCATCCACACGCCATGATGACCTGAATC
GCAGCGCATCAGACTTGTCGCTTGCGTATATATTTTGCCATGTGAAACGG
GGGAAGAAGTGTCCATGCAGTAATCGACTGTGAACTCACCAGGAATGG
UFO02118.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5565-RA | 942 | CG5565-RA | 157..876 | 9..728 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1354977..1355631 | 728..74 | 3275 | 100 | Minus |
| 2L | 23513712 | 2L | 1355702..1355768 | 75..9 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:55 has no hits.
UFO02118.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:51 Download gff for
UFO02118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5565-RA | 147..879 | 1..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:07 Download gff for
UFO02118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5565-RA | 147..879 | 1..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:48 Download gff for
UFO02118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5565-RA | 147..879 | 1..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:48 Download gff for
UFO02118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1354974..1355629 | 76..732 | 99 | <- | Minus |
| 2L | 1355702..1355774 | 1..75 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:07 Download gff for
UFO02118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1354974..1355629 | 76..732 | 99 | <- | Minus |
| arm_2L | 1355702..1355774 | 1..75 | 94 | | Minus |
