UFO02120.5prime Sequence
1105 bp (1010 high quality bases) assembled on 2008-12-21
> UFO02120.5prime
CAGTCGACATGCCGCGACGTAAGCCCACCATTAAGACCGATGTGATCGGG
GATCTGGACCTCAGTCCAGAGGTCGCCATCGATGACTATCGCGTCTCTCG
CCAGCAGGACCAATTCTTCGTGAAACCGCCCAATTGGGATTCGGCCGGGG
ATAACATCGAGATGCTGTACATAGCCAATCTCCGGGAGTACGACGCCATG
AAGCAGGTTCAGATCCAGCTACTCAAAGATGCCAAGCGGCAAGCCGCATT
AAATGTGCAGCGCATTCGCAAGATGTACAAGATTCAGGAGCGCCTGCGCA
AACGCTTCGTCGAGGTGAATGGATTCATCAAGGATTGTGCGGACAAAAAG
CGCAGTGCGGATAAGTCGATTCGCGAGGAGACCGTTCTCCACGCGGAGGT
CACCAAGGAGATAGACGAGTTCAAGACCTCCATTGCCGAACTGAGCACCT
TTCGCAATGCGCTCAAGGCCACGGTGGCTCAGTTTCAGCCATACGAGAGG
GTCCTGGAGGAGGTAGTCGAGGTGTCGGACATCTTCATCTCAACGAAAGA
CTGCATCGATCGATGTGACGCTCTAATGTTGGCCCAGGTGGAGATCAATA
AGCTGGAGAGCCAGAAACTCAACGAGATCGAGGAGATGCGCCTGCGAATG
GTTCAGATCACCAGCGAGGCGGCCTTGACCGTTTTGGGCCTCAAAAACGA
TCTGGCCCGTTTGGATCGTTCCTATGTCAGCTCGCGGGCCACTTGCCTCA
AGTGGGAAAAGATACTAAGTGCCTGCAAGGACACCACGTCGCTCTACAAC
CTGACAAGGAGCGCATGTTTGATGGCATTCAAATCCTGTACCGCATGCTC
TGCAAACGTCGAGACATTGTTCCCAGCTACCACAGCTATGAGATCGACAA
AATCATGAGCTTCATCATGCGCGAAATAAGTCTTCTTTCATCGGTCCTCA
GGAATGAGTCAATAGGCGATAAGTCGCGCTGACGTATGTGCGCAGCTTTC
TAGACATCGTTTGGCGCGCGGTCCCAGTAGTGTCAAATCTAATCAATCCT
AATCTATTCCAACTAGCTAGGAGAATCTGGTTGACTTGGCTTGATCCACC
ATAAA
UFO02120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10750-RA | 1175 | CG10750-RA | 119..1111 | 9..991 | 4735 | 99 | Plus |
CG10750-RB | 1175 | CG10750-RB | 119..1111 | 9..991 | 4705 | 98.8 | Plus |
CG17564-RB | 1305 | CG17564-RB | 471..905 | 273..707 | 420 | 74 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19300548..19301002 | 122..576 | 2275 | 100 | Plus |
2L | 23513712 | 2L | 19301058..19301345 | 577..863 | 1390 | 99.7 | Plus |
2L | 23513712 | 2L | 19300373..19300486 | 9..122 | 570 | 100 | Plus |
2L | 23513712 | 2L | 19301398..19301485 | 862..949 | 440 | 100 | Plus |
2L | 23513712 | 2L | 19298996..19299291 | 568..273 | 220 | 71.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:44:19 has no hits.
UFO02120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:50 Download gff for
UFO02120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10750-RA | 68..1028 | 9..964 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:24 Download gff for
UFO02120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10750-RA | 119..1079 | 9..964 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:22 Download gff for
UFO02120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10750-RA | 119..1079 | 9..964 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:22 Download gff for
UFO02120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19300373..19300485 | 9..121 | 100 | -> | Plus |
2L | 19300548..19301002 | 122..576 | 100 | -> | Plus |
2L | 19301058..19301345 | 577..863 | 99 | -> | Plus |
2L | 19301400..19301504 | 864..964 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:24 Download gff for
UFO02120.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19300373..19300485 | 9..121 | 100 | -> | Plus |
arm_2L | 19300548..19301002 | 122..576 | 100 | -> | Plus |
arm_2L | 19301058..19301345 | 577..863 | 99 | -> | Plus |
arm_2L | 19301400..19301504 | 864..964 | 96 | | Plus |