Clone UFO02120 Report

Search the DGRC for UFO02120

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:21
Well:20
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG10750-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02120.5prime Sequence

1105 bp (1010 high quality bases) assembled on 2008-12-21

> UFO02120.5prime
CAGTCGACATGCCGCGACGTAAGCCCACCATTAAGACCGATGTGATCGGG
GATCTGGACCTCAGTCCAGAGGTCGCCATCGATGACTATCGCGTCTCTCG
CCAGCAGGACCAATTCTTCGTGAAACCGCCCAATTGGGATTCGGCCGGGG
ATAACATCGAGATGCTGTACATAGCCAATCTCCGGGAGTACGACGCCATG
AAGCAGGTTCAGATCCAGCTACTCAAAGATGCCAAGCGGCAAGCCGCATT
AAATGTGCAGCGCATTCGCAAGATGTACAAGATTCAGGAGCGCCTGCGCA
AACGCTTCGTCGAGGTGAATGGATTCATCAAGGATTGTGCGGACAAAAAG
CGCAGTGCGGATAAGTCGATTCGCGAGGAGACCGTTCTCCACGCGGAGGT
CACCAAGGAGATAGACGAGTTCAAGACCTCCATTGCCGAACTGAGCACCT
TTCGCAATGCGCTCAAGGCCACGGTGGCTCAGTTTCAGCCATACGAGAGG
GTCCTGGAGGAGGTAGTCGAGGTGTCGGACATCTTCATCTCAACGAAAGA
CTGCATCGATCGATGTGACGCTCTAATGTTGGCCCAGGTGGAGATCAATA
AGCTGGAGAGCCAGAAACTCAACGAGATCGAGGAGATGCGCCTGCGAATG
GTTCAGATCACCAGCGAGGCGGCCTTGACCGTTTTGGGCCTCAAAAACGA
TCTGGCCCGTTTGGATCGTTCCTATGTCAGCTCGCGGGCCACTTGCCTCA
AGTGGGAAAAGATACTAAGTGCCTGCAAGGACACCACGTCGCTCTACAAC
CTGACAAGGAGCGCATGTTTGATGGCATTCAAATCCTGTACCGCATGCTC
TGCAAACGTCGAGACATTGTTCCCAGCTACCACAGCTATGAGATCGACAA
AATCATGAGCTTCATCATGCGCGAAATAAGTCTTCTTTCATCGGTCCTCA
GGAATGAGTCAATAGGCGATAAGTCGCGCTGACGTATGTGCGCAGCTTTC
TAGACATCGTTTGGCGCGCGGTCCCAGTAGTGTCAAATCTAATCAATCCT
AATCTATTCCAACTAGCTAGGAGAATCTGGTTGACTTGGCTTGATCCACC
ATAAA

UFO02120.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG10750-RA 1175 CG10750-RA 119..1111 9..991 4735 99 Plus
CG10750-RB 1175 CG10750-RB 119..1111 9..991 4705 98.8 Plus
CG17564-RB 1305 CG17564-RB 471..905 273..707 420 74 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19300548..19301002 122..576 2275 100 Plus
2L 23513712 2L 19301058..19301345 577..863 1390 99.7 Plus
2L 23513712 2L 19300373..19300486 9..122 570 100 Plus
2L 23513712 2L 19301398..19301485 862..949 440 100 Plus
2L 23513712 2L 19298996..19299291 568..273 220 71.6 Minus
Blast to na_te.dros performed on 2014-11-28 22:44:19 has no hits.

UFO02120.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:50 Download gff for UFO02120.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10750-RA 68..1028 9..964 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:24 Download gff for UFO02120.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10750-RA 119..1079 9..964 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:22 Download gff for UFO02120.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10750-RA 119..1079 9..964 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:22 Download gff for UFO02120.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19300373..19300485 9..121 100 -> Plus
2L 19300548..19301002 122..576 100 -> Plus
2L 19301058..19301345 577..863 99 -> Plus
2L 19301400..19301504 864..964 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:24 Download gff for UFO02120.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19300373..19300485 9..121 100 -> Plus
arm_2L 19300548..19301002 122..576 100 -> Plus
arm_2L 19301058..19301345 577..863 99 -> Plus
arm_2L 19301400..19301504 864..964 96   Plus