Clone UFO02123 Report

Search the DGRC for UFO02123

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:21
Well:23
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG10934-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02123.5prime Sequence

1128 bp (989 high quality bases) assembled on 2008-12-21

> UFO02123.5prime
CAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGGAGCTGGTG
GCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGCAATGTGCT
GCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGTCCTGACCG
CCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCACCGCTGCAG
AAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATGTGCACCCA
GGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAATAAACTGC
GGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTGAAGCCTAT
CCAAAAGTCTTTATGTTTTTGCGCCAAGATGTCTACTATTTGGGGCAGCT
TATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCACTCATGCCC
TGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATGAGACAGAT
GAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGCAACCAGCG
ATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAAGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAATCCAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAGCCATCACAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCTTGCGT
ATAATATTTTGCCCATGTGAAACGGGGGCGAAGAAGTGTCCAAATTGCCA
CGTTTAAATCAAACTGTGAAACTCACCAGGATTGCTGAAAACGAAAAACA
TTATTCTCAATAAACCTTTAGAAATAGCAAGTTCACGTAAACACGCCAAT
CTTGCAAATATTGTGTAGAAACTGCGAA

UFO02123.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-RA 1043 CG10934-RA 80..661 9..590 2910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17722418..17722999 9..590 2910 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:59:13 has no hits.

UFO02123.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:02 Download gff for UFO02123.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:02 Download gff for UFO02123.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:54 Download gff for UFO02123.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:54 Download gff for UFO02123.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17722418..17723010 9..600 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:02 Download gff for UFO02123.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13609923..13610515 9..600 99 == Plus