UFO02125.5prime Sequence
1119 bp (1014 high quality bases) assembled on 2008-12-21
> UFO02125.5prime
CAGTCGACATGATCTGGGACTTCTTTACCTTTATACGCGGAGCCACCGAG
TTCAGTGCCACTGCGCTACTGATTTTGCTCGGTTGCATGGGAGACTCAAC
GAACCAAGGTGGTGAGAGCAAATTCTTGGTGGCCAGCGTTCACTATGGCC
TGACGGTGATGGTGGTGATGCACGTGTTTGGCTTCGTATCCGGAGCCCAT
TCGAATCCATGCATCTCGATCTCATGCTACTTGATGGGCTACATCGCCCT
GGAAGTGATGATGATGTACGTGGTGTGTCAGATGGCCGGTGCTTTCCTTG
GTTACTTCCTGCTAATGCAACTGCTGCCCAAGGAGCTGGTGGACAAAAGC
AAGCCAGGCATTTGCCTGGTACAACCGATGGACACTCTGTCCACATACCA
GGTCGTCATCATCGAGTGCCTGCTGACCGCGGTCCTCGTGCTCGGATGGT
GCTCCTTGTGGGACGTGCGAAACGGAAGGTTCCTCGACTCGGTCGCCATT
CGCATGGGTCTCCTCGTGATCGCTTGCAGTTTCGCAGGGATTCAACTAAC
TGGAGCCAGTATGAACCCCGCCAAGACATTGGTGCCTGCCATATTCTACG
GCAGTCCGAATTCGGTTCTAATGCAGCTGACTGGCCAGATCCTGGCCGCC
ATCATGGTGCCCTTCGTGTGGAATCATGCGTATACGCCACCTTATAAGCC
CTTGGAAATTCCAGTGTGCAACGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCACCAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACTGAAAGCCATCACAACGCATGATGACTTGATCCG
CCAGGCGCATTCAGCACTTGTCGCTGGATAATATTTGGCCATGGTGAAAC
CGGGCCAAATTGTCTTATT
UFO02125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5398-RA | 938 | CG5398-RA | 133..846 | 9..722 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23602898..23603302 | 135..539 | 2025 | 100 | Plus |
2R | 25286936 | 2R | 23603366..23603549 | 539..722 | 920 | 100 | Plus |
2R | 25286936 | 2R | 23602717..23602844 | 9..136 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:36:31 has no hits.
UFO02125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:43 Download gff for
UFO02125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5398-RA | 125..852 | 1..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:39 Download gff for
UFO02125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5398-RA | 125..852 | 1..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:09 Download gff for
UFO02125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5398-RA | 125..852 | 1..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:09 Download gff for
UFO02125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23602709..23602844 | 1..136 | 97 | -> | Plus |
2R | 23602900..23603302 | 137..539 | 100 | -> | Plus |
2R | 23603367..23603555 | 540..729 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:39 Download gff for
UFO02125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19490232..19490367 | 1..136 | 97 | -> | Plus |
arm_2R | 19490423..19490825 | 137..539 | 100 | -> | Plus |
arm_2R | 19490890..19491078 | 540..729 | 98 | == | Plus |