UFO02131.5prime Sequence
1116 bp (1019 high quality bases) assembled on 2008-12-21
> UFO02131.5prime
CAGTCGACATGGTTAAAAACGAGCCCAACTTCGTGGTGGAGCGCATCATG
GACAAGCGCATTACCAGCGAAGGCAAGGTTGAGTACTACATCAAGTGGCG
TGGCTACACGTCGGCGGACAACACCTGGGAGCCCGAGGAGAACTGCGATT
GCCCGAATCTCATCCAGAAATTCGAGGAGTCGCGCGCCAAGTCCAAGAAG
CGCGGCGAGAAGAAACCCAAGTGCGAAGAGATCCAGAAGCTGCGCGGCTA
CGAGCGCGGCTTGGAGCTGGCCGAGATCGTGGGCGCAACGGATGTGACGG
GCGACATCAAGTATCTGGTGCGCTGGCAGTTCTGCGACGAGTTCGACTTG
GTGCCATCGGCACAGATCGTGGAGAAGGATCCGCAAATGCTGATTGACTA
TTTCCAGAAGATGGCACCTTACTCCCGTCACATTGCGATGCGAATGAAGG
GCGTGCCGGAGGAGCTGCGTTTGGCGGCCTCGCGCACCAGTTATCCGCAC
ATTAGCAGTGCGCCCGTCGAAGTGCCGCCGGAGGTGGATCAGTCCGCTGA
GTTGGCTGGACATCTTGGTGGAATCGCGCCACAGGTGGACCAGGCGCCGC
AGCACCATGCACCCATGGATCTAGCCAATGATACCGACGATTTGGCTAGT
GTTTCGTACTCGATTCCCGTGCCCGGCGTTGGCGACATTGCCATCGATGT
GCCCATGGCGGAAAATCAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAATC
AAATTACGCCCCCGCCCTGCCCCTCATCGCAGTACTGTGTATCATTAAGC
ATTCTGCCGACTGAGCCATCCCAAACGCATGATGACTGATCGCCCAGCGC
ATCAGCACCTTGTCGCTTGGGTATAATTTGCCATTGGGTGAAACGGGCGA
AGAGTGTTCTATTGGC
UFO02131.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HP1c-RA | 986 | CG6990-RA | 98..808 | 9..719 | 3555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22745717..22746427 | 9..719 | 3555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:58:41 has no hits.
UFO02131.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:37 Download gff for
UFO02131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1c-RA | 90..804 | 9..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:37 Download gff for
UFO02131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1c-RA | 90..804 | 9..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:35 Download gff for
UFO02131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1c-RA | 98..812 | 9..724 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:35 Download gff for
UFO02131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22745717..22746431 | 9..724 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:37 Download gff for
UFO02131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18571439..18572153 | 9..724 | 99 | == | Plus |
