UFO02132.5prime Sequence
1120 bp (1026 high quality bases) assembled on 2008-12-21
> UFO02132.5prime
CAGTCGACATGCGTCCGTTGATGCTTCAGGGCCACGAGCGTTCCATAACG
CAAATCAAGTACAACCGCGAGGGCGACCTGCTCTTCTCCTGCTCCAAGGA
TCAGAAGCCCAATGTGTGGTACTCGCTGAACGGAGAACGTTTGGGCACCT
ACGATGGTCACCAGGGTGCGGTCTGGTGCCTGGATGTGGACTGGGAGAGC
CGTAAGCTCATCACCGGCGCCGGTGATATGACCGCTAAGATCTGGGACGT
CGAGTACGGCACCGTTATCGCCTCCATTCCGACCAAGTCATCGGTGCGCA
CCAGCAACTTCAGCTTCTCGGGCAACCAGGCAGCCTACTCAACGGACAAA
GCGATGGGACAGAGCTGTGAACTGTTCCTCATCGATGTCCGCAACGCCGA
TTCCTCGTTGTCGGAGCAGGAGCCCACACTCCGCATCCCGATGACCGAGT
CCAAAATTACGTCGATGTTGTGGGGTCCTCTGGATGAGACCATCATCACA
GGTCACGATAATGGCAACATTGCCATCTGGGACATCCGTAAGGGTCAAAA
GGTGGTTGACTCTGGCACGGATCACAGCGCTGGCATCAACGACATGCAGT
TGAGCAAGGATGGCACCATGTTTGTGACCGCCTCCAAGGACACCACCGCC
AAATTGTTCGATTCGGAGTCCCTGATGTGCCTCAAGACCTACAAAACGGA
GCGTCCAGTAAACTCGGCGGCCATCAGCCCAATCATGGATCATGTCGTGC
TGGGCGGCGGTCAAGATGCCATGGAGGTGACCACTACGTCTACGAAGGCT
GGCAAGTTTGACTCGCGCTTCTTCCACCTGATATACGAGGAGGAGTTCGC
CCGACTCAAGGGCCATTTCGGACCCATCAACAGTTTGGCCTTCCATCCGG
ACGGCAAGAGTTACGCCCTCGGGCGAGAAAGATGGTTTCGTGCGTGTCCA
GACATTCGATAGTACATACTTTGAGAACATCTCGAGGCAGCTTTCTAGAC
ATTCGTTTGCGCGCGGCCCAGGTAGTGTCATAATCATAATCATTATCATA
ATCATATCACAACTAGGCTAAGGAGATCCTGGTATGAATATGGCTTGATT
CTCACCAATAAAAGCCCGGC
UFO02132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trip1-RA | 1177 | CG8882-RA | 83..1055 | 9..982 | 4800 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4967022..4967514 | 503..11 | 2465 | 100 | Minus |
| 2L | 23513712 | 2L | 4966489..4966971 | 982..499 | 2325 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:42:10 has no hits.
UFO02132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:36 Download gff for
UFO02132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 86..1072 | 9..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:40 Download gff for
UFO02132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 83..1069 | 9..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:13 Download gff for
UFO02132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 83..1069 | 9..997 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:13 Download gff for
UFO02132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4966489..4966968 | 502..982 | 99 | <- | Minus |
| 2L | 4967024..4967514 | 11..501 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:40 Download gff for
UFO02132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4966489..4966968 | 502..982 | 99 | <- | Minus |
| arm_2L | 4967024..4967514 | 11..501 | 100 | | Minus |
