UFO02140.5prime Sequence
1138 bp (1021 high quality bases) assembled on 2008-12-21
> UFO02140.5prime
CAGTCGACATGCTGAGAAGGATGAACACTTTTAGTGGTCAAAAGCTGGCG
GCTGTGGTCAAGGAGCTGGAGAACTTTGCTCCGACTTCTTGGGCAGAGAA
GTGGGACAATGTGGGACTCCTGATCGAACCGCACCGCGAAAAACAAATCA
AGAAAATACTATTAACTAACGATTTAACCGAGCCCGTAGTGAAAGAAGCG
CTAGAGAAGGAGGCGGAGCTCATAATCAGCTATCATCCGCCAATTTTCAA
GCCCCTGACCAGGATTACGCAGTCACATTGGAAGGAGCGCGTGGTGGCAG
CATGCTTGGCCAACGATATAGCCTTGTACTCGCCCCACACGGCGTGGGAT
AAGAAGAGTGGTGGCGTCAACGACTGGCTATCTAAGGCAGTGAATATCAT
CAGCATCCGCCCTCTGGAACCGGAGTTGGGTGCTCCTCCGGGTACCGGAT
CCGGTAGATATATAGAAACCAAAATGGAGCTTTCCCAGGTGGTGGAGTCT
CTGCAAAAGCGCATTAGAAACAGCGTGCACGTTGCTCTAGCTGTGGGCCA
CACCCCCAAGACACTCATCCAATCCGTCGGCATTTGTGCCGGCTCTGGAG
CATCTCTGCTGAAGGGTATCCAAGCGGATCTTATCATTACCGGCGAAATG
TCCCATCACGAAGTTCTGGAGTTTACTCACAACAATACCACCGTTCTTCT
CTGCAATCATAGTAATTCAGAAAGGGGTTTTCTCCATGAGTTTTGCCCTA
TATTGGCCAAATCTTTAAATGAAGAATGCCTGGTATTTGTATCTGAAGTG
GACAAGGATCCTCTGGTCACCGTGGCTAGCGATATAAACAAAGAACTAAG
CGCATTTGTTGACGTCTACAGAGCACATCAAAAGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATATCATATCACACTAGCCTAGAGATCCTGGTCATGACTAGTGCTGATTC
TCACATAAAAACGCCGGCGCACGACGTCTGAACAATCAGATGGAGTTCTG
AGTCATACTGAATCTATCACAGGAGTCAGGCGGCTCGGATTCATACGCCC
CGCCTGCACTCATCGAACGTGAATCATAGCATTCTGCG
UFO02140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4278-RA | 1063 | CG4278-RA | 89..964 | 9..883 | 4355 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16327157..16328032 | 9..883 | 4330 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:51:53 has no hits.
UFO02140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:26 Download gff for
UFO02140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4278-RA | 81..969 | 1..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:46 Download gff for
UFO02140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4278-RA | 83..971 | 1..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:08 Download gff for
UFO02140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4278-RA | 83..971 | 1..892 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:08 Download gff for
UFO02140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16327151..16328039 | 1..892 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:46 Download gff for
UFO02140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16327151..16328039 | 1..892 | 99 | == | Plus |
