UFO02142.5prime Sequence
1083 bp (1005 high quality bases) assembled on 2008-12-21
> UFO02142.5prime
CAGTCGACATGGGACGTTTAATTCTGGAACACACGCTGCAGGGCCACAAG
GGGCGCATCTGGGGAGTGGCATGGCATCCTAAGGGCAACGTATTCGCCTC
GTGCGGCGAGGACAAAGCCATCCGCATTTGGTCGCTGACCGGGAACACTT
GGAGCACAAAGACCATCCTATCCGATGGCCACAAGCGCACTATTCGCGAG
ATCCGATGGTCTCCATGCGGTCAGTACTTGGCCTCGGCCAGCTTTGATGC
CACCACGGCGATCTGGTCGAAATCCTCGGGAGAATTCGAATGCAACGCAA
CATTGGAGGGTCACGAAAACGAGGTGAAGAGCGTTAGCTGGTCGCGATCC
GGCGGACTACTGGCCACCTGTTCGCGGGACAAGTCCGTGTGGATCTGGGA
GGTTGCCGGCGATGATGAGTTCGAGTGCGCCGCCGTTTTGAACCCGCACA
CACAGGACGTGAAGAGAGTGGTGTGGCATCCAACCAAGGACATTTTGGCC
TCCGCCTCGTACGACAATACCATAAAAATGTTCGCAGAGGAGCCCATAGA
CAACGACTGGGATTGCACAGCCACTCTTACTTCACACACAAGCACGGTTT
GGGGCATTGACTTCGATGCTGATGGCGAGCGCCTGGTTTCCTGTAGCGAT
GACACCACAATAAAGATTTGGAGGGCCTACCATCCCGGAAATACAGCCGG
AGTGGCTACGCCCGACCAGCAAACCGTGTGGAAGTGCGTGTGCACAGTGT
CCGGGCAGCACTCGCGGGCTATCTACGACGTGTCCTGGTGCAAGCTTACA
GGTCTGATAGCGACTGCCTGTGGCGACGACGGCATTCGTATCTTTAAGAG
AGCAGCGACTCCAGCCAGACGACCCACGTTCGAGCAGATACCGCGGAGAG
CGCTCACGATCAGACGTAACTCGTGCAGTGAATCCTGTGTGCCGGCAACT
GATATCATGCAGCGATGATGCACATAAAATTGAAAGTGACGAGCAGCTTT
CTAGACATCGTTGGCGCGCGGCCAAGTAGTTGTCTTATCTATCTATCCTA
ATCTTATCCACTAGCTAGGAATCTGGTCTGACC
UFO02142.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ciao1-RA | 1186 | CG12797-RA | 90..1090 | 9..990 | 4550 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14854075..14854959 | 890..9 | 4275 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:21:00 has no hits.
UFO02142.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:23 Download gff for
UFO02142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ciao1-RA | 105..1110 | 1..990 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:22 Download gff for
UFO02142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ciao1-RA | 85..1090 | 1..990 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:17 Download gff for
UFO02142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ciao1-RA | 85..1090 | 1..990 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:17 Download gff for
UFO02142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14853959..14854964 | 1..990 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:22 Download gff for
UFO02142.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10741464..10742469 | 1..990 | 97 | | Minus |
