UFO02143.5prime Sequence
1099 bp (1003 high quality bases) assembled on 2008-12-21
> UFO02143.5prime
CAGTCGACATGAGCAAAACTAGCAACATCATGCGTTTGGCGCTGCTGCAG
CTCAAGGGTTCCAAGGACAAAGTGGCCAATGTCCAAAACGCCGTCACCAA
AATCGAGGCGGCGGTCAAGGAGCATAAACCCCGATTGATCACTCTGCCGG
AGTGCTTTAATGCTCCATACGGCACCAAGTACTTTCGGGAGTACTCCGAG
ACCATTCCCGATGGCTATACCTCGCAACAGCTCTCCAATTTGGCCAGGAA
GCACCAGGTGTACATCGTGGGCGGAACAATCCCTGAACTGGGCGAAAACG
ATGCCATCTACAACACCTGCACGGTTTGGTCACCCACTGGTGACCTTGTG
GCCAAGCATCGCAAGATGCATCTCTTTGACATAGATGTCAAGGGTGGCAT
TCGCTTCAAGGAGTCGGAAACGCTGTCCGCAGGCAATGATTTCACCATCA
TCAACGTAGATGGCCACAAGATTGGCATCGGCATCTGCTACGATATTCGA
TTCGAGGAGATGGCGAGGCTCTATCGCAACGCAGGCTGCGAGATGATCAT
CTATCCGGCTGCATTCAACATGACCACTGGTCCACTGCACTGGGAGCTAT
TGCAGCGATCCCGTGCCAATGACAACCAACTCTTTGTGGTCACAACATCA
CCAGCCCGTGACACAAGCGCCGAGTATGTAGCCTATGGCCATTCCATGGT
GGTGAATCCATGGGCCAAGGTGCAGCAGAGTGCCAGTGAAAGGCGAGGAA
ATCGTGGTGGCCGATATAGATTTCTCCGAGGTGGAGCAGTGCGTCAGCAG
ATTCCCGTCTTTGGGCAAAGACGTCTAGATCTGTACGCCACCGAAAGGAA
AGGCAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATATCACAACTAGCCTAGAG
ATCCTGTCATGACTAGTGCTTGATTCTCCCCAATAAAAACGCCCGGCGCA
CCGAGCGTCTGACAATCCAGATGAGTCTGAGTCATACTGGATCTATCAAC
AGAGTCAAGCGAGCTCGAATTCCATACGCCGCCTGCCACTCATCGCAGT
UFO02143.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8132-RA | 1069 | CG8132-RA | 73..921 | 9..857 | 4170 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9401641..9402470 | 28..857 | 4025 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:58:30 has no hits.
UFO02143.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:21 Download gff for
UFO02143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8132-RA | 41..901 | 1..862 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:29 Download gff for
UFO02143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8132-RA | 66..926 | 1..862 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:28 Download gff for
UFO02143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8132-RA | 66..926 | 1..862 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:28 Download gff for
UFO02143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9401641..9402475 | 28..862 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:29 Download gff for
UFO02143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5227363..5228197 | 28..862 | 99 | == | Plus |
