UFO02145.5prime Sequence
1129 bp (1027 high quality bases) assembled on 2008-12-21
> UFO02145.5prime
CAGTCGACATGTCCGAGCGAAAGGTCTTAAACAAATACTATCCCCCGGAC
TTCGATCCATCGAAGATTCCGCGCATGAAACTGGCCAAAAACCGGCAGTA
CACCGTGAGATTGATGGCTCCATTTAATATGCGCTGCAAAACGTGTGGGG
AATACATATACAAGGGCAAGAAATTCAACGCTCGCAAGGAGGACGTGGAG
AACGAAACGTACCTGGGCATCAGGATCTATCGGTTCTACATCAAGTGCAC
GCGCTGCCTGCAGGAGATCTCCTTCAAGACAGATCCACAGAACACGGACT
ACGAGATTGAGGCGGGGGCCACCAGGAATTTCATGGCACTCAAGTTGGCC
GAGGAACAGGCACGTCGCGAGGAGCAGGAATTGCGCGATGAGGAGGCCAA
CAATCCGATGAAGCTGCTCGAGAATCGCACCCAACAGTCGCGCAACGAGA
TCGAAACGATCGAGAGCCTGGAGGAGTTGCGTGATCTCAACCGGCGTCAG
CAGACAGTGGACTACAACACTCTGCTGCAGCAGTACAACACGGTGGAGAC
GGAGAGAGAGCGCCAGGAGCGGGAGGAGCGCGAAGACGAGGATTTTATTA
AGTCCGTAAACTTTAAGAACAAGCCAGAAGGAAGCTCTCGTGTTGTCGCT
GAGGAAATCATTGAGGAGATCAAGGATGAACCGTTGGACACACCGTCAGC
TCCTCCACCAGCCAAACAGGCCAAGCCCAGCACGATCAGTCTTTCCGCCA
CATCCTCCAGCAAAGCATCCGCAGCGCAGTCAATGGTTAAAAGGAAGACA
CCATTGGTGCTGGTCAAGCCCAAGGCAACCGCAGTAGCAAGCCCACGGTA
GCCACTGGAACGACGCAAGTTGAATCCAAACCAGCCGCAACCACGCCCTC
AGTTGTGTCTGCACAGCGGAAACTAAAGCTACAATCAGCAGCTGCGCTCC
AGCTGACTTTCCTCTTGCTGCTACAGTGACAGCTCAGAAGGATCAACGCA
GCTTTCTAGACATCGTTTGGCGCGCGGGCCAGTAGTGTCATAATCAAATC
TAATCATAATCATTATCAAACTAGCTAGGAAATCTGCCATGAATCTATTG
GCTGATTCAAAATAAAAGGCGGGGCACGA
UFO02145.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8435-RA | 1148 | CG8435-RA | 79..1067 | 9..988 | 4720 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16170135..16170705 | 603..33 | 2855 | 100 | Minus |
| 2R | 25286936 | 2R | 16169742..16170080 | 934..598 | 1580 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:20:53 has no hits.
UFO02145.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:18 Download gff for
UFO02145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 60..1065 | 1..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:18 Download gff for
UFO02145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 72..1077 | 1..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:14 Download gff for
UFO02145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 72..1077 | 1..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:14 Download gff for
UFO02145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16169681..16170076 | 602..988 | 97 | <- | Minus |
| 2R | 16170137..16170705 | 33..601 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:18 Download gff for
UFO02145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12057186..12057581 | 602..988 | 97 | <- | Minus |
| arm_2R | 12057642..12058210 | 33..601 | 100 | <- | Minus |
