Clone UFO02154 Report

Search the DGRC for UFO02154

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:21
Well:54
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG4338-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02154.5prime Sequence

452 bp (11 high quality bases) assembled on 2008-12-21

> UFO02154.5prime
CAGTCCACATGAGTGGACGGAACCGCGGCAAAGGAAAGAACGGTGGAGGA
GGACCCTACCACTGTGTCTAAACGAATCACAATTGTGCCCGCCCCTTTGC
TCTTCCCCGAACGAGCTGGCCGGCAGCAGTAGCAGCGAAAATGAAAGTTC
CGACTCGGAATCCTCGGGAGATGGAGCCCAAAATGATCTCTTTTTTCCGC
CGGAGTTTGCGGTGGCCATGTGGGACCTCAACCAATGACATCCAAGTAAG
TGTTCGGGCAGGAAACTGGCCCGACTAGGACTCTTTTCAAATCTTCGAAT
GGTTCAGAAGTTTCCTGGCCTTGTCCTCTCGCCCGTTGGGCAGTTGTGTG
TAAGTCCGCTGGATCGCTATGTGGTGGCCTCTTCGGGCGTGGCCGTGATC
GCTGCTCGTGGGCCATTCTGGACGAGACGCCCTTTGGAAGGATGCGCAGC
CC

UFO02154.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG4338-RA 953 CG4338-RA 93..538 9..452 1670 91.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15275614..15276059 9..452 1620 91.9 Plus
Blast to na_te.dros performed on 2014-11-28 23:35:04 has no hits.

UFO02154.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:06 Download gff for UFO02154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4338-RA 75..524 1..452 91   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:30 Download gff for UFO02154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4338-RA 89..538 1..452 91   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:56 Download gff for UFO02154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4338-RA 89..538 1..452 91   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:56 Download gff for UFO02154.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15275610..15276059 1..452 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:30 Download gff for UFO02154.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11101332..11101781 1..452 91   Plus