UFO02155.5prime Sequence
1105 bp (983 high quality bases) assembled on 2008-12-21
> UFO02155.5prime
CAGTCGACATGTTTGACTGGACCGGTAAGAATGTTGTCTATGTGGGCAGC
TTCAGCGGCATTGGATGGCAGATGATGATGCAGCTGATGCAGAAGGACAT
CAAGATGATGGGCATTATGCATCGCATGGAGAACGTTAAGATGATGAAGA
AGCTGCAGGCCATTAATCCATCCGTGAAAGTGGTCTTCATGCAAATGAAC
CTCATGGAAAAGATGTCGATCGAACAGGCGATGAAGAAAATGGGTCAAAT
GATGGGACACATTGATGTGATGATCAATGGCGAGGGTGTCCTGCTCGACA
AGGATGTGGAGACTACGATGGGCATGAATCTGACTGGCATGATCCAGTCG
ACGATGATGGCCATGCCCTACATGGACAAGACACAGATGGGCATGGGTGG
CATGGTGGTTAACATGTCCTCTGTCTATGGCCTGGAACCCGCGCCCGCCT
TTTCTGTCTACGCCGCTGCCATGCACGGCATCCTCGGATTCACCCGCTCC
ATGGGCGACAAGATGATCTACCAAAAGACCGGCGTCATGTTCATGGCCAT
GTGCCCGGGACTCACCAACAGCGAGATGATTATGAACCTGCGCGACAACG
TTACCTGGCACCACTCCGAATCCATGGTGGAGGCCATCGAGAGCGCCAAG
CGCCAAATGCCCGAGGAGGCAGCCATGCAAATGATCCACGCGATGGAGAT
GATGAAGAACGGCAGCATGTGGATTGTGAGCATGGGCCAGCTGAAGGAGG
TTACGCCCACGATGCACTGGCAGATGGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACAATAAAAACGCCGGCGGCACCGAGCGTTCTGAACAAATCCAGATGGA
GTCTGAGTCATTACTGGATCTTATCACAGGAGTCAGCGAGCTCGATATCA
ATACGCCCCGCCTGCCATCATCGCAGTACTGTGTAATCATTAGCATTTGC
CGACTGTAGCCATCACAAACGCATGATGAACTGATGGCCACGGCATCAGA
CTGGT
UFO02155.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbp2-RC | 871 | CG3763-RC | 65..832 | 9..776 | 3840 | 100 | Plus |
| Fbp2-RB | 1074 | CG3763-RB | 152..919 | 9..776 | 3840 | 100 | Plus |
| Fbp2-RA | 916 | CG3763-RA | 76..843 | 9..776 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9427318..9427762 | 332..776 | 2225 | 100 | Plus |
| 2L | 23513712 | 2L | 9426935..9427258 | 9..332 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:11:05 has no hits.
UFO02155.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:20:05 Download gff for
UFO02155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbp2-RA | 69..853 | 2..784 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:25 Download gff for
UFO02155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbp2-RA | 69..853 | 2..784 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:41 Download gff for
UFO02155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbp2-RA | 69..853 | 2..784 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:41 Download gff for
UFO02155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9426928..9427258 | 2..332 | 98 | -> | Plus |
| 2L | 9427319..9427772 | 333..784 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:25 Download gff for
UFO02155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9426928..9427258 | 2..332 | 98 | -> | Plus |
| arm_2L | 9427319..9427772 | 333..784 | 99 | == | Plus |
