Clone UFO02175 Report

Search the DGRC for UFO02175

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:21
Well:75
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13130-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02175.5prime Sequence

1134 bp (938 high quality bases) assembled on 2008-12-21

> UFO02175.5prime
CAGTCGACATGATGATGATGATGATGGTTGCGACGATGAGAATGAGGATG
ATGATGATGATGATGGGGAACACAGGCAGCTGGGCCTGGGAGCAGCTTTC
ATTGAAAGCATTTCCCTTTTTCGACACATTAATGAAATGTAAAATAATCT
GCCCGAATGGGCAAAAACTTTCATTAGATGAGTTGGGCATGCCACTTTTG
TGGTTAACTCGGTGTATTAAAATAAAACTGATTTCGATCCCAGGACCATC
ACACTGGAATTCGCCAAGGGAAAATTATAGTTATGATATAGTTGCTATAA
TAGTTAGTATATATAAAATTATACATATTTTATTCCCGAACATATCGATA
ATAAGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTTGCGTATAATATTTTGCCCATGGTGAAAACGGGG
GCGAAGAAGTTGTCCATATTGGCCCACGTTTAAATCAAAACTGGTGAAAC
TCACCCAGGGATGGGCTGAGACGAAAAACATTTTCTCAATAAACCTTTAG
GGGAAATAGGCCAGGTTTCACCGTAACCACGCCACATTTTGCGAATATAT
GGTGTAGAAACTGCCGGGAAATCGTCGTGGGTATTCACTCCAGAGCGATG
AAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAGGGGGAACACCAAT
CCCATATTCACCGGCTCACGGTCTTTTCATTGCCATACGAAAATTCCGGA
TGAGGCATCATCAGGCGGGGCAGGAATGGTGAATAAAGGGCCGGATAACC
TGTGGCTTAATTTCTTTACGGTCTTGAAAAGGGC

UFO02175.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:53:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9983701..9984048 356..9 1740 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:53:08 has no hits.

UFO02175.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:28 Download gff for UFO02175.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13130-RA 370..720 9..360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:06 Download gff for UFO02175.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13130-RA 456..806 9..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:41 Download gff for UFO02175.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9983701..9984048 9..356 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:41 Download gff for UFO02175.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9983701..9984048 9..356 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:06 Download gff for UFO02175.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9983701..9984048 9..356 100   Minus