UFO02176.5prime Sequence
1108 bp (1015 high quality bases) assembled on 2008-12-21
> UFO02176.5prime
CAGTCGACATGTTCGGATTGCTGCGACACCTGTTCAAATTTCAATTTCTT
TTCGTTGTGGCAGCCGTTCTGGGCGGAATTTATCACACAGAGATTAGGCA
GTTCCTGCGTCGCCAAACGGACAACTACCTGGACCAAGCTGGGCAGGATG
CGAGCATTCCCCTGGCGTTCCAAGCTGGTGACGATATCGGCACGCTCTTT
ACACCGGCCGAGTTGGCCAAATTCAATGGCGAGGAAGAGGGTCGTCCGCT
TTACCTGGCTCTACTCGGTTCCGTCTTCGATGTGAGCCGCGGCATTAAGC
ATTACGGATCCGGCTGCAGCTACAACTTCTTCGTGGGTCGCGACGCCTCC
GTATCCTTCATTTCCGGTGATTTTGAGACGTACGATCCGGAAACGGCCGA
CGATGTGTTAACCCTAAAGCCGGACGACCTGATTGGTTTGGCCGGATGGC
GGGATTTCTATCAAAAGGACTACGTCTACAAGGGACGGGTAATTGGGCGC
TTCTACGATGAGAAGGGCGCCCTGACCACCTATCATCATAAGTTTCTGGA
GCTGCTGGAGCAGGCACGAGATGCCAAGCGACAGGTGGAGGAGCTGCGTG
CCCGGTATCCCGGCTGCAATATCGAGTGGAGCGAGGAGCGCGGCACTCGC
GTCTGGTGCACCACGACCAGTGGCGATGGCAAGGAGCGCTCCTGGATCGG
TTATCCGCGCAAGCTGTACAGTCGCGGCAACAAGAGTTTCCAGTGCGCCT
GTGTGCCGGATGCGGAGCTGGACGAGATCGATGCCGGCGGCAAGGTGGCT
CACGGTGATGCCATGCTGAAACCCTACGACATTGCGAGCCACAGGCCAGG
AGTGCTTCTACAGGGTGGCCAGCTTTCTAGACCATTCGTTTGGCGCCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATATCATAATCATAATCCACA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCCTCACAATAA
AAACGCCCGGCGCACCGACGTTCTGACATCCGATGGAGTTCTGAGTCATT
ACTGATTTATCACGGATCAAGCAGCCGATTCAATTACGCCGGCTGCCACT
CTATCCGC
UFO02176.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12056-RA | 952 | CG12056-RA | 24..884 | 9..867 | 4255 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9192692..9193552 | 9..867 | 4205 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:01:28 has no hits.
UFO02176.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:26 Download gff for
UFO02176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12056-RA | 17..888 | 1..873 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:29 Download gff for
UFO02176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12056-RA | 17..888 | 1..873 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:13 Download gff for
UFO02176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12056-RA | 17..888 | 1..873 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:13 Download gff for
UFO02176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9192685..9193556 | 1..873 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:29 Download gff for
UFO02176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9086718..9087589 | 1..873 | 98 | == | Plus |
