UFO02185.5prime Sequence
1041 bp (943 high quality bases) assembled on 2008-12-21
> UFO02185.5prime
CAGTCGACATGTGGCGGGCTTTGGCACGAACGACGTTGAGAGCAGTAGCC
AACGATTGCGGTTCACCAGGAGTCGGTCTCGCACCATCAGCGCTGACGCA
GCACCAATTGCGACATTCCAAGGCCAGCAATAGGTTCATCACCACCACCT
CCACAGCCCCACCACACAATATCGGAATCATGAGCGTAGAGAAGCCAAAG
ATTGTCTTTGTTTTGGGCGGTCCCGGGGCCGGCAAGGGCACCCAATGCTC
CAGGATCGTGGATCGCTTCCAATTCACCCATCTCTCGGCCGGCGATCTCC
TGCGCGAGGAGCGGTCGCGGGAGGGCTCCGAATTCGGTAACCTCATCGAG
GACTACATTCGCAATGGCAAAATTGTGCCCGTCGAGGTCACGTGTTCGCT
GCTGGAGAACGCCATGAAGGCGTCGGGAAAGTCGCGGTTCCTCATCGACG
GCTTCCCACGCAATCAGGATAATCTGGACGGTTGGAACCGCCAGATGTCC
GAGAAGGTGGACTTCCAGTTTGTCCTCTTCTTCGACTGCGGCGAGGATGT
GTGCGTCAAACGGTGTCTGGGCCGCGGCCAGAGCGGCTCTGGCCGGACGG
ACGACAACCTGGACAGCCTGAAGAAGCGCATCTCGACATACAACAACGAC
TCGCTGCCCATCATCAAGTTCTTCGAGGGCGCCGGCCAGGTGAAACGGAT
CGATGCCAGTCCGGATGCGGAAGAGGTGTTCGGGGAGGTGGAAAAGATAT
TTGTGGCCAGCGGCTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAAAAA
ACGCCCGGCGGCTACGAGCGTTCTGAACAATCAGATGGGAGTTCTGAGGT
CATACTGATCTATCACAGAGTCAGCGAGCTCGAATCAGTACGCCCCGCTT
GCACTCATCCGAGTACTGTTGTAATTCATAGCATCTCGCCG
UFO02185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dak1-RA | 1202 | CG6092-RA | 94..861 | 1..767 | 3800 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26054578..26055336 | 767..9 | 3795 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:37 has no hits.
UFO02185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:17 Download gff for
UFO02185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sld5-RC | 1029..1804 | 1..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:43 Download gff for
UFO02185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 94..869 | 1..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:11 Download gff for
UFO02185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dak1-RA | 94..869 | 1..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:11 Download gff for
UFO02185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26054570..26055345 | 1..777 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:43 Download gff for
UFO02185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21880292..21881067 | 1..777 | 99 | | Minus |
