UFO02192.5prime Sequence
1096 bp (987 high quality bases) assembled on 2008-12-21
> UFO02192.5prime
CAGTCGACATGAATGGACCAAGCCTCCTCGTAAAGTTGACCACACGTGCC
TTCCTGTTATTCAACGGTCGCCCCCAGAATCGCTGGCTAAAGTCGATGGC
CAATAGTATGGTTTGCTCGCGAGGCGTCTCTCCAGAATTGATTGCCCAGC
TGGGAAAACCACCTAGGATGCGCACAAACCCGGCATTCCGGAAGGTGGCA
ACTCCTGAGTTCAAAAGCATATTTACCCCCGAGCTGAATGACCTTGTGGC
GCTCTTTAAGAAGTACGACTACGAGCTGCGGATCGCCGGCGGAGCTGTGC
GCGACATTCTGATGGGCATTCCACCGAAGGACATCGACTTGGCCACCACC
GCCACTCCGGATCAGATGAAGCAGATGTTTGAGAAGGAGGAGGTGCGAAT
GATAAACGCAAACGGCGAAAAGCACGGCACCATCACTCCTAGAATCAATG
ACAAGGAGAACTTCGAGGTGACCACATTACGCATCGACATCCGCACCGAT
GGACGCCATGCGGAGGTGATGTACACGACTGACTGGCAACTGGATGCGAA
CCGCCGCGATTTGACAATCAACTCTATGTTCTTAGGCTTTGATGGCACCG
TGTACGATTACTTCTATGGCTACGATGATCTCCAGGAGCGTCGCGTGGTC
TTCGTGGGCGAAGCAGATATTCGCATTAAGGAGGATTTTCTGCGCATCCT
GCGCTATTTCCGATTCTACGGACGCATCGCAAGTGAGGAAAACAACCACG
ATAAGGCCACCCTGGCAGCCATAAAGGAAACGCGAAAGGTCTTGCGAGAA
TAAGTGGCGAGCGGATCTGGTCTGAGCTCCAAAAGATAGTGCCGGGAAAT
TTCGGAGCCGCATTGTTTCTGGAGATGCACCGTTGTAACCTATTCGAGTA
CATTGGCTGCCTAAAGAGCCATATCTGGATGAGTTCGACGCTTTGCAAAG
CGCTAGATCATTTGAAAGCACATCAGCGATTTGTACTGCAGATGCTGCAC
TCGTGAGACGCATGAATGCACAACGCTGAGCTTCGCTACGACCGGAACTG
CTAGTCATACAGACGAAGTTGCTCCCAGGTACCGAACCTGCTGACA
UFO02192.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2100-RB | 1597 | CG2100-RB | 98..1133 | 7..1023 | 4755 | 98.2 | Plus |
| CG2100-RA | 1586 | CG2100-RA | 98..1133 | 7..1023 | 4755 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5735301..5736258 | 960..7 | 4625 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:20 has no hits.
UFO02192.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:19:54 Download gff for
UFO02192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 133..1163 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:08 Download gff for
UFO02192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 92..1122 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:26 Download gff for
UFO02192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 92..1122 | 1..1014 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:26 Download gff for
UFO02192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5735301..5736261 | 1..960 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:08 Download gff for
UFO02192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1561023..1561983 | 1..960 | 99 | | Minus |
