UFO02211.5prime Sequence
1129 bp (1006 high quality bases) assembled on 2008-12-21
> UFO02211.5prime
CAGTCGACATGCGAGGGAGCTGGCCCAGGCTTGGGTTCCCGGCGCTGCTC
CTGCTCCTCCATCTGCTGACCGGCTCGGATGCCGCCGTCCGGAATGGGAC
TGCAAAGCGGGAAATTGGCGATTCCCGGGGAAGCAGCGGCACCTGCGTCA
AAGGGTTCCTGCAGGAGATCCTGCCACTGCCAGCGACTTGTCCGCCTGAG
GTGCTCGGGATGAGGGGCGCCGTGTATATCCTTTACGACGTAAACATCTC
CGAGGGCTTCAACCTGCGCCGAGACGTCTATATTCGCATGGCGGTGTTCG
TGCGCCGGCTGCAGAGGAGAAGGCGCTTTCGCCATGTGCGCCTTGTGCTG
CCGCCGTGGCCCCGCCTCTACCACTGGCACTCGCAGGGCCTGCAGCAATC
TGGACTGCCCTGGAGCCACTTCTTCGACTTGGCCAGTCTGCGTCGCTACG
CGCCCGTTCTGGACTACGAGGAATTCCTGGCCGAACAGCGCTTATTCGGC
AATCCTGGCGCACCGCTGGTCCATGTAGGGCACGCTTTCCGGTTGCAGCA
CTACGAGGTCATGCTAGAACAGGGCATATTTCGGGACAAGTTCGAGCGCG
TCACGGACAAGCCGTGCAGCGAGGGATCCCTGTCGGGAGGACCATTGCTG
CAGCAGGCGGAGCTGCGCGTGGGGCGTTTCCACTGCGTTCGGTTCCAGGG
CAGCGCCGGACTGCTGGAGAAGTTGCTTCGCGAGGCGATCGACGAGGACA
CGGCGGGACCGGAGGACGTCGACGACATGCGCACGTACGCTTTGCTCAGC
GCCGAAACGGTGCTTCACGACCACTGGGGCGACGAGCACTTTTGGCAGGC
CCGGCGTTCCATGCGTTTCGCCCGTCGGCTCGAACAGGTGGCCGCCGACT
TCCGACGGCAGGCCCTGAAAACACAGATGCTTCGGCCGGTGTCCAACGGC
CCGCCATGTGGGAGCTGGAGCGGCCGAAGCGCACGCCAAGGGCGGCGAAT
AACTCTGCGCCCACTAAGGCGGGGCGACTTTGTTCGCTCGCGGAATGCCA
ACACTCCCACCTGAAGGCGGCTGCCCAAACAAGTCAAGGCGCCGTGCGTT
GCGCGGATTAAAACAATGAAACACACGAT
UFO02211.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut2-RA | 1634 | CG14789-RA | 18..1090 | 9..1077 | 5160 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1464907..1465979 | 1077..9 | 5060 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:36:27 has no hits.
UFO02211.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:23:22 Download gff for
UFO02211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 454..1536 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:31 Download gff for
UFO02211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..1100 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:56 Download gff for
UFO02211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut2-RA | 18..1100 | 9..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:56 Download gff for
UFO02211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1464907..1465979 | 9..1077 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:31 Download gff for
UFO02211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1358940..1360012 | 9..1077 | 98 | | Minus |
