UFO02219.5prime Sequence
1117 bp (1020 high quality bases) assembled on 2008-12-21
> UFO02219.5prime
CAGTCGACATGGCCACGGAGGAGCACCAGCGCCTGGCCAGCATCGTGAAG
AGCTGCCACGAAAGCCTGCGCCAGTTGACTAAGGAGTATGGCGCCACAGC
GGCCTGGCAGGAGCACACGAGTCCCAGGAACGCCAAGCAACTGGCGGAGT
ACGCCAAGGCGATGAAGCAACTGGCGGCCATATGGGAGACCAACGATGGG
AAGGTGGAGCTGCAGGCACGCAGCCGCATCAAGTGGGCCATCGACTACAT
CACCAAGTACTTCTTTACCGAGGGCATATATTTGCAGAAGCGCCAGCGGG
AGCAGCGACTCCTGGAATCCTACAGAGCCGAGGGAAAACTGGGCGAGGTG
CAGTGCAGGCTGATGGAGGAGCCGCCGGACAGGCTGCACGTCCTGGATGT
GGGCAGCTGCTTCAATCCCTTTTCCAGTGCTCCGCACTTGGAGGTAACCG
CCCTGGACTTGTGTCCCGCCACCGAAGATGTGCTGCAGGCGGATTTCCTC
AAAGTGGAGGTGGTACCCGGAATACGAGAACCTGAGCTGGAGGAGGGCAG
CGTAAGAAGGCTACCAGCAAGCCACTACGAGTGCGTCATTTTCAGTTTGC
TACTGGAATACATGCCCAGCGCCGAGCAGAGACTACAGTGCTGCCTTCAG
GCCTACGACCTGCTGCTGCCCGAGGGCATCCTTGTGCTCATCACACCGGA
CTCCCAACATGTTGGCAAAAACGCCCACCTCATGAAAAACTGGCGCTACT
CCCTGGCCAGGATTGGACTGCTACGGGTACGCTTCGAGAAGTTGCCGCAC
ATATCGTGCATGGTGTTCCGCAAGGCCATCAGCCGGGAGCTCTCACAGCA
CTGGGCGAGCATTCACCGGGAGGAGGGGATGTGCGAGGAATTCGGATACC
GCAGGACGATAGCGCAAGCTTTCTAGACATTCGTTTGGCGCGCGGGCCCA
GGTAGTGTCATATCATATCATAATCATATCATAATCACACTAGCTAGAGA
ATCTGGTCATGACTAGTGCTTGATCTCACAATAAAACGCCCGCGCACGAG
CGTTCTGACCATCGATGGAGTTCTGAGGTCATTACTGAATCTATCCGGAT
TCAGCGAGGCTCGATTC
UFO02219.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..984 | 5..913 | 4510 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604555 | 5..913 | 4485 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:00:32 has no hits.
UFO02219.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:59 Download gff for
UFO02219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 32..944 | 1..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:06 Download gff for
UFO02219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 72..984 | 1..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:52 Download gff for
UFO02219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 72..984 | 1..913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:52 Download gff for
UFO02219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603643..24604555 | 1..913 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:06 Download gff for
UFO02219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491166..20492078 | 1..913 | 99 | == | Plus |
