UFO02227.5prime Sequence
1053 bp (854 high quality bases) assembled on 2008-12-21
> UFO02227.5prime
CAGTCGACATGGACAGCGAGTCGTTGGCCTGTTCGTCGGTGGAGAAGGAC
CTGACCCGAGTGGTCAGCAAACTGGAGCAGCTTCACGAGAACGCAGAGGC
GGACATCGGAGATATAGCCACACAGATGTCGGAGCTGGTAGAGGTTCTCA
GCAGGGCGGAGCAGCTGGTGACCACTCTGAACTCGAGCACCCAGGTGTCC
CAGGACGATCCCATGGGCGATGCGGTGAGCATGCAGGTGGAGACGGAACC
GACGGCACCACAACGCCTAACCGAGCGCCAAGTGGAGAGCGTCCGGAATG
CTCTCGCCAGGTGCCACGAGCGCGTGCAAAAACTGTCCACGGAGCACCGC
GATCTGCACGGCTCCATTTCGAAGATCGGCAAGGCCATTGACCGCAACTT
TAGCGCCGACTTCTCGTCCACCATGCGAGTGGACGTGCTGCAGGACGAGG
AGAACCTGATGTTGCTGAACAAGGCCATTGCCAAGCATTATTGTCGCCAG
GGCATGGACGATGTGGCTCGCACGCTAATCCGCGAGTGCAAGATGTCGCC
GGAGCATGCCCAGGATGTGTTCGACTCGGAGCGCGAGTTTGCCGACATCT
ACGGCATTTGGGTGAAGATCCAAAAGCGGGATCTGACTGACGCCCTCAAG
TGGGCAAAGATGTACTCCCAGCAGCTGAGTGACCGCCACTCGCTCATAGA
GTTCCGGCTGCACCGCATGCGTTTCATGCAGCTGGTCTCCTACGGATTGG
ACTCGAGCGCGAGGCCATCTCCTACGCTCGACTGAACTTCAAGAAGTTTG
CTGTGCGCTATGAGCACGAATAGCCAACTTGATGGCCAGCTTTATATATC
TGCCCAGTGGACTGGAGAACTCGCCTTACAGCACTTCTTGAGCCAGGAGA
AGTGACCGAACTGTCGTTATATTCCTCAAAGACGCTTGCCTACTTGCTAT
GCATTAGCAGACTCCGCCTGTTCTGTTTGTGGTCAATGCCGATGCACTGC
CCTGCCGCTTGCTCAATATCAGCAGTGATGCAGTTCACGCAAGTCTTTGC
ATT
UFO02227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3295-RA | 1853 | CG3295-RA | 247..1282 | 9..1034 | 4735 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21016180..21017200 | 1021..9 | 4450 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:01:51 has no hits.
UFO02227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:51 Download gff for
UFO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1293 | 9..1045 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:45 Download gff for
UFO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1293 | 9..1045 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:27 Download gff for
UFO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1293 | 9..1045 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:27 Download gff for
UFO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21016154..21017200 | 9..1045 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:45 Download gff for
UFO02227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16903659..16904705 | 9..1045 | 97 | | Minus |
