UFO02231.5prime Sequence
1103 bp (1015 high quality bases) assembled on 2008-12-21
> UFO02231.5prime
CAGTCGACATGTTGTTACTGGCGCTAATCGTTGTGATACTATCACTGCTC
GTCTTCGCGGCCCGACGACGTCATGGATACTGGCAGAGAAGGGGCATACC
GCACGACGAGGTACACCCGCTTTTCGGAAACATCAAGGACTGGCCAAATA
AGCGGCACATTGCCGAGATCTTTCGGGACTATTACTTCAAGTACAAGAAC
TCCGATTACCCATTCGCTGGATTTTTCTTCTTTTTCACCCGCACTGCTGT
GGTCACCGACATGGAATTGCTCAAGAGGGTGCTGATCAAGGACTTCAATC
ACTTTGAGAATCGGGGAGTCTTCTACAACGAGATCGATGATCCGCTGTCG
GCCACCTTGTTCAGCATCGAGGGTCAGAAGTGGCGTCATCTGCGGCACAA
ACTGACACCCACTTTTACGTCCGGCAAAATGAAGAACATGTTTCCGATTG
TTGTGAAAGTTGGAGAAGAAATGGATAAGGTCTTCAGAAGTAAAACCGCT
GCGGATCGGGGTCAAGTTTTGGAGGTTGTGGATCTGGTGGCACGGTACAC
CGCCGATGTGATCGGCAACTGCGCATTCGGTCTCAATTGCAACAGCTTGT
ACGATCCAAAGGCTGAATTTGTGTCAATTGGCAAGCGGGCGATCACCGAG
CATCGCTACGGGAATATGCTGGATATATTCCTCTTTGGATTTCCCAAGTT
ATCGCGCCGCTTACGTCTGAAACTAAATATCCAGGAGGCAGAGGACTTTT
ACACCAAGATCGTGAGGGAAACCATTGACTACCGTCTACGGACGAAGGAA
AAGCGAAATGATTTCATGGACAGTCTGATAGAGATGTATAAGAATGAGCA
GTCGGGAAATTCGGAGGATGGCCTGACCTTTAACGAACTTCTCGCTCAGC
TTTCATATTTTTGTGGCTGGGTTTGAGACAGCTCCACGACCATGGGATCG
CTCTATATGAGCTGCAGACAGGATGTTCAGGATAACTCAAGGAGGAGATG
GCATGTGTTCGGCAGCAAACAAGAGTTCACCTACGAGGGATCAGGAATGA
ATACTGGGCAGGTGTGGATGGAAACGCGTCGCGGATACAGTACTGTCTAT
CTC
UFO02231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a17-RB | 1727 | CG10241-RB | 28..1117 | 9..1077 | 4885 | 97.8 | Plus |
| Cyp6a17-RA | 1546 | CG10241-RA | 28..1117 | 9..1077 | 4885 | 97.8 | Plus |
| Cyp6a23-RA | 1761 | CG10242-RA | 69..978 | 42..948 | 1735 | 80 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14873980..14874939 | 9..964 | 4600 | 99.6 | Plus |
| 2R | 25286936 | 2R | 14875897..14876806 | 42..948 | 1660 | 79.3 | Plus |
| 2R | 25286936 | 2R | 14878162..14878240 | 365..443 | 185 | 82.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:39:28 has no hits.
UFO02231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:45 Download gff for
UFO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a17-RA | 3..1077 | 1..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:46 Download gff for
UFO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a17-RA | 22..1096 | 1..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:33 Download gff for
UFO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a17-RA | 22..1096 | 1..1057 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:33 Download gff for
UFO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14873974..14875048 | 1..1057 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:46 Download gff for
UFO02231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10761479..10762553 | 1..1057 | 97 | | Plus |
