UFO02235.5prime Sequence
1126 bp (997 high quality bases) assembled on 2008-12-21
> UFO02235.5prime
CAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGACTGGATTGG
TTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTTCCTGTGCT
CTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGGCACCTACT
TCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTCTGGAGAAG
TGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTGGCCCACCA
ACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAGGCTGATTC
CCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAGAACATGGC
CTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGTTGCAGTTC
CATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAGGGACGGTC
CACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTACAGCTGCC
GATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATTTTAAGGAT
GTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACTGGTAGACG
CGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGGCAGATATA
ATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAAGCTTCGACGAC
CGGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATTTGTGAAC
AACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACGAAATCCT
CCGTGTGGATGGACGCTTGGTGACCATTACCTTCCACTCGCTGGAGGACA
CTATCGTGAAGCGTCACATCAACGGAACGTCCTGCAGCGCCGCCAATGCT
CTTCCCCTCAAGTACTCCAGCCATTATGCAATAGACGAGCCAGATATACT
AGATCACTGACCAGAGAGCTGGAAACACTACTCGCATGTCATTGTGCCAG
ACGCGACGAGGTGGCGAGGAACCCACGCCAGTCGATCCGCCAAGCTGAGA
CAGCCGTCAAAACAACGCAAGCTTTCTAGACATCGTTGGGCGCGCGGCCA
GGTAATGGCCATACCTATCTAATCTA
UFO02235.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1470 | 9..1065 | 5000 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698939 | 9..1065 | 4700 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:11:32 has no hits.
UFO02235.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:54 Download gff for
UFO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RB | 392..1467 | 1..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:43 Download gff for
UFO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 395..1470 | 1..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:55 Download gff for
UFO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 395..1470 | 1..1065 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:55 Download gff for
UFO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697864..10698939 | 1..1065 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:43 Download gff for
UFO02235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523586..6524661 | 1..1065 | 98 | | Plus |
