UFO02249.5prime Sequence
997 bp (-106 high quality bases) assembled on 2008-12-21
> UFO02249.5prime
CAATCCACATGAAGTGCTACATCTTGGCTGCCCTGTTGCTGGCCACACTA
TCCAGCGGTGAGAACATCTTCAAGATCAACATAACTCCCGAGGAGGCGCA
ATTTTTCCTTAACAGCCCCCATGTGCGTGGTATTGGCGACATCCAGTATG
CCCCGGAAACCGGTGAGAATCCCCTGCCCGAGGCGCGCATCTATAAGGGA
GAGTTCGTCTACGTGGGTCGTGTGATCGAGCATCCCGAGGAGTATGTGGA
GGATCACTACTATGCCCATCAGTATCATGGTCAGGATGGTTTGGGTCAAT
TTGCCTATGGCTATAGGGATTGGAACCAGGGCAAGAACGAGAAGCGCGAT
GAGACGGGCAAAGTGACCGGATCGTACAAGTATGTCCAACCACATGGCCG
TGACTTTGTGGCCAACTATTATGCTGATAAGACCGGTTTCCATGTGGAGG
ACAATCGTCCGGCACACCTTAAACTGCCGGCCACTAATACTCCGGCTGTC
CTCAAGGCCGAGGAGGAGCACTTCAAGCTGTGGGGTGAGCTGGCCGCCGC
CGCTGGCCACAATCCCGATCCTTATGCCGCCAAGTACCAGCAAGAGGGTC
GCTACCTTCCCACTGAGCCCGAGTACCATCCCTACGTGCACGAGGAGCCG
CCATATGTGCCCGGACCCGATGATACCGGCGAGCCCAAGGACTTCTTCTA
CGCCTTCTACTACAATGTCCCCCTGTTGCGCAACAAGGAGGAGCGTGCCG
AGCTCGAACGCCTGCGTGCCATCAACAATAGGATGAGGCAAGCTTCTAGA
CCATTCTTTGGCGCGCGGGCCCAGTAGTGCTCATAATCATAGCATAGTCA
TAATCATAATCGCTACTAGCCTATGAGATCCTGTCATGACTAGTGCTTGG
ATTCTCACTATAAAAAAAGCCGGCGGCTACCTAGCGTTCTGATGAGTCAG
ACGAACTTCTGAGTCTTCATTGCATCTATCAACACGCAGTCCAGCGA
UFO02249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-RA | 1010 | CG3672-RA | 85..872 | 2..787 | 3470 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9405289..9406026 | 41..778 | 3285 | 96.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:11:29 has no hits.
UFO02249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:24 Download gff for
UFO02249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 85..882 | 1..796 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:41 Download gff for
UFO02249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 83..880 | 1..796 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:53 Download gff for
UFO02249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 83..880 | 1..796 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:53 Download gff for
UFO02249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9404879..9404921 | 1..41 | 95 | -> | Plus |
| 3L | 9405290..9406044 | 42..796 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:41 Download gff for
UFO02249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9397979..9398021 | 1..41 | 95 | -> | Plus |
| arm_3L | 9398390..9399144 | 42..796 | 95 | | Plus |
