UFO02260.5prime Sequence
1137 bp (1036 high quality bases) assembled on 2008-12-21
> UFO02260.5prime
CAGTCGACATGGATAGCACGTCAGCCAGCGTAGTGTATACGAATTCTTTT
TACGCTCCAAATTACTCGGACACCCAGCAGCCACAGCCACAGCTGCAGAC
TCAGCAACAGATGTTCCATGCCAACTACATCGTCGGAACCACATTGGGTT
CTGGATTGGGATTTAATTTTGCACCAGCCCCCATTCCCCAGGCGAGTGCC
GCTTCCGGTTTGAGTCCCAGAGGCATGTACAGTGATCTCTACCGCTACGA
GGATGGAAGCGGCGATGCCAGCGGTTCCTTGCTTCTGGTCCAAGAGGATG
ACCACTTCTGTGGTGCAGAGGCGGACCAGCAGTTGGTGGCCAGCACGTCG
TCCTCATGCCCGATGGCGAGTTCAGGCGAGTCCGTGAGCATTGACACAGA
GCAGGAGGCGGAACGGGATCTTCAGATGAACCAATGTGAGACGCTGGAGC
GGGAAGAGCTGAATGGAGATATAGGGGAAATGGGGGAAATGGAGGAGCTT
GCAGAGGAGGTTAATGGCGAGCAGAGGCCGCCGCTGTTACCCTGCATGGG
TGGCAACACATCCTACATGGTGTTCCCGCGCACCGCCGCCGACTACATGC
CCCGCCTGGCGCTCCCGCGGCATAGGCCCTATATAAGCATCGGTCAGGAG
CAGTACGTGATCCAGGCGGAAACTGTCTTCGTGCTGGGCATGCGCCTCAA
TGTGACCAAGAACGACATCATCCTGTTCTTCGGCAAAGTGGGCGTTATCA
AGATGGACGAGTCGACCAACAAGCCGAAGATCTTCGTCTACAAGAACAAG
ATAACGGGGCGCTCCAAGGGTGAGGCCACTATAACCTATGTGAGTCCATT
CTCTGCACAGGCGGCGATTAGTTGTCTGAGTGGGGCCAAGTTCATGGGAC
AGTGATCACCGTTCTGCCCGCCTACCTATCCACCCGGAGGGGCAGTGTCC
GGTACAGTTATCCGCGAGAGCTATGCGCCGAGCACCACGTCGCCAGCGGG
CATGAATGAGCCAGCCATCGACATTGGGTGTGCATGCCTCTGCCGAACAG
CACTTCGTCTGGCGTCAGCTGCACAGATGCAGCGACAGTGTCCCTCTCGA
ATACAGGAGTCCTGGCGATCACGCAAGAACCGGTCCC
UFO02260.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 132..1218 | 8..1080 | 5070 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11700745..11701744 | 8..1002 | 4785 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:01:42 has no hits.
UFO02260.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:26 Download gff for
UFO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1218 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:39 Download gff for
UFO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1218 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:22 Download gff for
UFO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1218 | 1..1080 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:22 Download gff for
UFO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11700741..11701831 | 1..1080 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:39 Download gff for
UFO02260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526463..7527553 | 1..1080 | 98 | | Plus |
