UFO02266.5prime Sequence
1107 bp (997 high quality bases) assembled on 2008-12-21
> UFO02266.5prime
CAGTCGACATGAGCGCCTATTATCGGCGCGCGGCGTTGCGGAAGAAGAGC
CCAAGCCGAGGGTCATCCTTCGAGTTGGAGATGAACGAGTCTGGCTACAC
ATCCTTCCTGGCGCTGCACAATTCCACCGCGGAGACGCCATTTTTATTGG
AGGACGCTGAGGGCGAAAACTGTCGCAATGCATCGAATACCACAACATTC
TTTCGGGGGCTGAACACGCCCAGTGGCCACCAGGAGCAGGACCTTTACTG
GGGCAAGCCCTATCCCAGAACACAGCCCCAAAAGAAATTTTCCGCGGAGG
AGGAGCCTTTCTCTATGACTCCGCGTCTGCAGGATGAGCATAGTCTGCCC
AAGCGACGCAAGAAACACTTTCAATCGCCACACAGTAGCCCCAAGAAGTC
CAAAAAGCTGCTCTTTCCCCACATAGAAGAACCGCCCAAGAATCGCTTCT
ACGGCGGTGTCGAAAAGCTGGATATCGTGGCCAAGCTGGCGCAATGGCAA
CCGGCACTGCAGTGCATACTGCGTCATGTGGGCGCCCACACGCTGGACGT
GATGACCAAGGTATCGCCGGCCTGGAAGCAGGCTGTTTATCGCAGCCAAC
GCGACTTGGAGCGCCTACAGAACCACCGACTCAAATTGAATCTAACCAAA
GAGAATCCTCACGTGCCCAAGCGGTGCAGCCATGTGCCCAAGGCAAACCA
CACAGTGCCATTGCAGACCTCGAACCATAGCAGCCTGGCCAACAGCGCCG
CCTCGCTAATGGACTCGGGCAACTCGAGCATCCACCTGATGGACGTGGAT
GCCGGAAGGGTGCTGCGCGAGCAGACGCAGCGCGTCAAGTGTCCGCGATG
CGGTCGAGGCAGCCGGGTTTTCATAAGCGAGGCGGCCAGTGTGGCGAAAA
CCTATGTCGCAAACTCTGCCTATTGGACGTACAACCAGCACATTCCCTGC
ATGACGGTCGCTCTCAAACGCTTCTGTCCCTGGATCTGACGAGGTCAGGA
CTCACGGCAAGGACGCCATATAACTCGCGAATGCACACATGTCATCTGCA
GTTTCCGTTCTGCTCACTGTTCTGGCAAGTTGATTCGGCGAGCGTTGCTG
TCACGAA
UFO02266.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rca1-RA | 1552 | CG10800-RA | 108..1214 | 9..1098 | 4960 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6852422..6853448 | 9..1025 | 4645 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:32 has no hits.
UFO02266.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:12 Download gff for
UFO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rca1-RA | 91..1125 | 1..1025 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:47 Download gff for
UFO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rca1-RA | 100..1134 | 1..1025 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:42 Download gff for
UFO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rca1-RA | 100..1134 | 1..1025 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:42 Download gff for
UFO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6852414..6853448 | 1..1025 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:47 Download gff for
UFO02266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6852414..6853448 | 1..1025 | 98 | == | Plus |
