UFO02268.5prime Sequence
1077 bp (985 high quality bases) assembled on 2008-12-21
> UFO02268.5prime
CAGTCGACATGCTCCTGCTGATACCGCTTTTCCTGACCCTTTTGGGGGCT
GAGGCCCAGCAATTTGGCAAAGCTATCATGCATTTTGGCAACTGCAACTC
GGTGGAATTCGGTAGGGGCACCTGTATCGAGAAGAAGGACTGCGACTTTT
ATGCCGTAGATAAACTTATGGAATTGGCCAGCAAACAACAGTGCTTCTCC
CGCCAGCGACCCGATCTGGTTTGCTGCCCCCGCGAGACGAATATTATACC
GCCATTGGCACCCAGGATCAGTAATGGGACCACTAATGCCACGAGCAGCA
CCACAACGCTGAAACTGCTGCCTCGCACCACGCCACGCCCACCCAGCGGT
ATCGACCAACTGCCCGAGCATCCGTACTGCGGCTCCGCCTTTTCGTTTCG
CTTGGTCGGTGGTCATAATACCGGACTCTTCGAGTTCCCGTGGACCACTC
TGCTGGAGTACGAGACAGTGAGCGGTGGCAAGGACTATGCGTGCGGCGCA
TCCTTTATCGCCCAGAGATGGCTCTTAACGGCCGCCCACTGCATTCACAC
AATGGGCAGGAATCTCACCGCAGCCATTTTGGGTGAATGGAATCGGGACA
CCGATCCGGATTGCGAGAATGATTTGAATGGCGTACGCGAATGTGCTCCG
CCGCATATCCGGGTGACCATCGATCGAATATTGCCGCATGCGCAGTACTC
GGAATTGAACTATAGAAACGATATAGCCCTGCTGCGTTTATCACGTCCGG
TGAACTGGCTGCAGATGCAGAATCTGGAGCCCGTCTGTTTGCCACCGCAG
AGGGGCAGGTATGCCAATCAGCTGGCCGGCTCAGCCGCCGATGTTTCCGG
CTGGGGCAAGACCGAGTCCAGCGGCAGCAGCAGATCAAGCAAAAGCGATG
CTGCACATCCAGCCGCAGGATCAGTGCCAGGAGGCGTTTACAAGGACACA
GATTACGCTCGCCGATAGTCAGATGGGGTGCCGGCGGCGAGATGCGTGAT
CTGCATGGCGACTCCGGCGACCACTGACGTAAAGCAAACACGGCGAGGCG
CAATCGATTGTTATCTGCGGCGGTCTC
UFO02268.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ser7-RA | 1413 | CG2045-RA | 105..1178 | 9..1067 | 4920 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9865971..9866750 | 218..993 | 3625 | 99.1 | Plus |
| X | 23542271 | X | 9865459..9865609 | 70..220 | 755 | 100 | Plus |
| X | 23542271 | X | 9865337..9865397 | 9..69 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:15 has no hits.
UFO02268.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:10 Download gff for
UFO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser7-RA | 114..1193 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:17 Download gff for
UFO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser7-RA | 99..1178 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:47 Download gff for
UFO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser7-RA | 99..1178 | 1..1067 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:47 Download gff for
UFO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9865331..9865397 | 1..69 | 94 | -> | Plus |
| X | 9865459..9865607 | 70..218 | 100 | -> | Plus |
| X | 9865972..9866835 | 219..1067 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:17 Download gff for
UFO02268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9759364..9759430 | 1..69 | 94 | -> | Plus |
| arm_X | 9759492..9759640 | 70..218 | 100 | -> | Plus |
| arm_X | 9760005..9760868 | 219..1067 | 97 | | Plus |
