UFO02270.5prime Sequence
1094 bp (983 high quality bases) assembled on 2008-12-21
> UFO02270.5prime
CAGTCGACATGGCGGTACTCTGGTGGTTGCTCTCGTTGCAGGTGGTGCTG
ATCTTACCGCCCAGTTACCACCTGGCCACGCCCTCCTCCGGGAGCGGTCA
ATTGCGTCGTCTTTGGCTGCAGGATCATTGCAGTGCGGGAATTTGCACGA
ATGTCGTGATTGGTCGCAGTGATTATGTGATCCTATCACAGGCCCCCATT
GGGGGCACCACCATGCTCACCTTTCTGAACTCGAGCATTGCCAAGATACC
GCATTTGTTGTTCGACACCTTTCCGGATCTACAGGTTCTGCGCATGGAAA
ACTGTTCGCTGGAAACTTTCGAAAAACCGCAGTTTGAAGGTGCCAGCAAT
CTGATGAGCTTGTTCTTGGGATATAATCGCCTGAAGGATATACCTAAGAA
TATATTCTTGGGCGCAGACAATCTGGCCACATTGCATCTGCAAGGAAATC
AGTTGAAGCAGCTGGGAAATCATAGTTTCCATGCCTTGAAAGAAGTGAAG
GAACTTTCGCTGGCGGAAAATCAACTTGAGCAAATTTCTCTAGGAGTTTT
TAGCGGCATGAGGAAACTAATGGACCTAAATTTGGCTGGCAATCGATTAG
ATGCTCTACCAAGAGGCGTCTTCGATCGGAATTTAAACCTTACCAAACTA
AATCTGGCCAGAAACCGGTTCACCGCCTTCGAATCGGAACTGTTGAAGCT
GCAGCCAGTATTTACGCAGTTGGATATCTCTGGAAATATCTTCCAGGAGT
TAACACTCAACTTTACCATGCTGGATGTGGCTATAGCTCATAGTTGCGAT
TTGAGGAGGTTGACCGTCTACGGAGTGATCCATGAACTGGATTTGCACAA
CAACTCGCTGAGGGAAATGCCACACATTCCACTGGCCGCCATGTGAGCAG
TCTGGATTTGTCGCACATCCATTGGAAACCTTCAGGTATCCGTTGCGTAG
ATCACATCGCTATTGCGTGATCTTTCTGCCACCGTGCCACGAGTGCCAGA
GGATGTCAAGAACAGAGCATCTGCATGTGATATATCAGAACTCTATATAC
TCGTGAGATCCCATCCTCGACGGTTGGAGGCCTGCAATTCTACT
UFO02270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| alrm-RA | 1717 | CG11910-RA | 109..1202 | 8..1075 | 4815 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25381708..25382673 | 967..8 | 4535 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:38:38 has no hits.
UFO02270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:17 Download gff for
UFO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11910-RA | 120..1221 | 1..1075 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:25 Download gff for
UFO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alrm-RA | 101..1202 | 1..1075 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:03 Download gff for
UFO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alrm-RA | 101..1202 | 1..1075 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:03 Download gff for
UFO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25381580..25382680 | 1..1075 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:25 Download gff for
UFO02270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21207302..21208402 | 1..1075 | 97 | | Minus |
