UFO02272.5prime Sequence
1144 bp (988 high quality bases) assembled on 2008-12-21
> UFO02272.5prime
CAGTCGACATGATTCTTCGCGATATGGGAGAAGCCACAGTGAGAGCTGCA
CTGTTAGCGGTTTTGGGAATCCTGCTGATCGCGGGCTGTGATTGCAGCCA
GCGGTTCAAGTACGAGATCAAGGAGTTCCAGGTGCCGCTGGACCATTTCA
GCTTCCTGATCAACGCCACCTTCAACATCCGGTACTTGTACAACGACTCG
TTCGTGGACAAGAGCAATGCCCGCACCCCGATTTTCTTCTACACGGGCAA
CGAGGGGGACATCGAACTCTTCGCCCAGAATACCGGATTCCTGTGGGAGC
AGGCGGAACGACAGCGGGCTCTGGTGATCTTTGCGGAGCATCGTTACTAT
GGAAAGTCATTGCCCTTCGGTAGCTCCACGTTCAACACCAGCCTGCCGGA
GCACTTGGCTTACTTCACAGTGGAGCAGACGCTCGAGGACTACGCCATGC
TGATCACGTTCCTGCGGAACGATCGCCAGATGCCCGTGGTGGCCTTCGGG
GGCTCCTATGGCGGAATGCTGGCCGCCTGGTTCCGGATGAAGTATCCGCA
TTTGGTCAACGGAGCCCTGGCAGCCTCGGCGCCCGTTCTGCAGTTCCCCG
GGATAACCGATTGCGACATCTTCTACAGGATTGTGACATCGGTGTTCCAG
AATGCCTACAACGAAAACTGCACCTTGAATATTGCCAAGTCGTGGAAACT
CTTCGAGACTCTGGGCGCCAGCGAGGCCGGCAAGAAGCAGATATCGGATG
CATTCCACCTATGCAATGCCCTGAAGAACGACGACGATCTGAAGAAGTTC
CTGGACTACGTGGAGGAGGTGTACAGCAATCTCGCCATGGTCAATTACCC
GTACAACAGCAGTTTCCTGGCCCATTACCTGCCTATCCCGTGAGGCAGTG
TGCTACTACCTGAAGGAGCTGCATTCCACCGACGCCGATTTGCTGCACGC
CATGTCCAGCGCTTTGGCTGTCTACACCACTACACCACAGTCCGCCAGTG
CCTCGATATTATCCGTCCACCTCCACCGCCGATGACCTCCGTGATATTCA
GAGCTGCACCAGATGGTGATGCCCATCTGCTCCATGCCTCGAACCATGTT
TCCGCCACGTCCAGCTTGAAACCTTCAGGGAAATACGCGGAAAA
UFO02272.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2493-RB | 1677 | CG2493-RB | 75..1213 | 9..1144 | 5140 | 97.6 | Plus |
| CG2493-RA | 1860 | CG2493-RA | 75..1213 | 9..1144 | 5140 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20462290..20463370 | 1084..9 | 4840 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:38 has no hits.
UFO02272.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:14 Download gff for
UFO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 72..1183 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:51 Download gff for
UFO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 67..1178 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:46 Download gff for
UFO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 67..1178 | 1..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:46 Download gff for
UFO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20462267..20463375 | 1..1105 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:51 Download gff for
UFO02272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20462267..20463375 | 1..1105 | 97 | | Minus |
