UFO02275.5prime Sequence
1099 bp (976 high quality bases) assembled on 2008-12-21
> UFO02275.5prime
CAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACCACCCGTGG
GAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCGATGACGCC
CTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGACGGCGTCC
TGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCAAGTGGACG
CACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAACGCTCCAC
GGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAACCTCACCT
TCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGCCGCATCCG
TCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTGACCGTCTT
TGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTCGACCATTA
GCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGATCGGGCTG
ATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAACTTCTGCA
CAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCGGAAGAGCA
TGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGATGCACATT
ACGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCGACATGCA
GCATCACAAACGCATGATGTACTGATCGCAGCCGCATCAGCACTGTCGCT
TGCGTATAAATATTTGCCCATGTGAACGGGGCGAGAGTGTCATATGCACG
TAAATCAACTGGTGAACTCACCAGGAATGCTGAACGAAACATATTCCCA
UFO02275.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| slmo-RE | 1419 | CG9131-RE | 235..879 | 9..653 | 3225 | 100 | Plus |
| slmo-RD | 2056 | CG9131-RD | 1007..1651 | 9..653 | 3225 | 100 | Plus |
| slmo-RC | 1703 | CG9131-RC | 654..1298 | 9..653 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6047056..6047700 | 653..9 | 3225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:33 has no hits.
UFO02275.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:22:03 Download gff for
UFO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slmo-RC | 449..1097 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:04 Download gff for
UFO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slmo-RC | 650..1298 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:59 Download gff for
UFO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slmo-RC | 650..1298 | 1..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:59 Download gff for
UFO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6047056..6047704 | 1..653 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:04 Download gff for
UFO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6047056..6047704 | 1..653 | 99 | | Minus |
