UFO02291.5prime Sequence
1107 bp (985 high quality bases) assembled on 2008-12-21
> UFO02291.5prime
CAGTCGACATGGACGAGGAATTCTCTAATCAGCCCATCGATCCAAGCATC
GCTCGGAGTGACTACTCCCGGAGTCATTTCGTTAACCAGAGCTCCATGAC
ATTGAGTCGCGGATTGGACTCCACCCGACTGCTTTTCGTAGGCGAAAACT
TCCAGCAGACGCGCAGCGAACAGGACTTATTTTACGACTGTCAAGGTCCG
GGTGAGGACTCGCCAAAGGAGGGCCGTAGTGCCACCAGCCGGTGCAAGTT
CGATGATCCGGCTGCGATACGGGATGCCCTGGAACGGGCGGCCAATGCCA
CACAGATGCTACTCAAGAATTTTGACAAGTCAGGTGGTTGGAATCAGCCA
TGTGCCGTCACCCTGGAGTTGACCGCTCGGTTGGTGGACCCCAAGAAGGG
TCGCGCTGGTTGTCCGTTGCACGGAAAGCCCGTCACCGTCCAGATGCCGC
TGGAGTTCAATCCGCAGAGCGGCAAGATGGTCAAGTGTCAGCAAAAGAAA
CAACCGGTCACCAGGCATCGCAAAGAGTCCATCTGCCAGTGCCGCTCGCA
GCAGTATATGCGTTCCGGTCCAAGGGCTCCAAAGCCCAGCTCAGGTAAAT
CCGCCAGCAAACACTTTCGTCCATGTGCATCGCAACAGCTAGCCGAAGGG
TCCGCCAGTTCGGTATACATAGGAAGCTGTGGGGATTCAACATCTCAGTG
TAACCGTTGCACTCCGGCCACATGTTGCCGCTGGCACGACCCGGGGGCAC
GGGAGGTCATCTCAATCTCCTGCCTGACCTTGCCGGATATCGAATCAGAG
CTCACTCTTACCCCAGTGCCTGAGCCACTGCCAATTGAAGAACCGTTGGT
GGAGATAGAACCAACGGCCCCGAAGGAGCACTTGATAATCTATGCTCCAG
AGCCGGACACCCGATCACCGAGTCGATGAATCCGATGAGCTCTTGTCTAG
CGAGCAGAATGTTAGACCGCAGCGGAAAAGAAATGGGACCGCCGCCGCCG
AAAGATCGCCGGAAGCAGCGTACTACTTGCCTGCCTCAAACAGAGTTCTC
CACTGTCGCGTTCGTTTCGATCAGTCTATTATGACCAGGAGGCAATGTGT
TTTTGTC
UFO02291.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33191-RA | 1545 | CG33191-RA | 88..1207 | 9..1103 | 4965 | 97.6 | Plus |
| Pif1B-RB | 4148 | CG33720-RB | 96..681 | 9..594 | 2930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8778825..8779836 | 1012..9 | 4685 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:35:59 has no hits.
UFO02291.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:49 Download gff for
UFO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..1086 | 1..1000 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:11 Download gff for
UFO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..1086 | 1..1000 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:27 Download gff for
UFO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..1086 | 1..1000 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:27 Download gff for
UFO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8778838..8779840 | 1..1000 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:11 Download gff for
UFO02291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4604560..4605562 | 1..1000 | 98 | | Minus |
