UFO02293.5prime Sequence
1124 bp (1019 high quality bases) assembled on 2008-12-21
> UFO02293.5prime
CAGTCGACATGCGTGGACAACTGTTGCTGAAGGGACCCGCATTGGCGAGG
AGCTTGAGCCGGTGCCGCGTAAGTGCCGTGCCCCAAATTGGATCTGTTCG
TCATGTGACCGCCGGCTGTGCAGCTGGTGATACCGTCAAGGGCGGCAAAG
GAATCGTCTTGGGCCTCTACGAAAAGGAGTCGGGCAAGGGACCTCGATTA
ACGCCTGCTGGCGAAAAGTTTGACGATCGTGTGCAGGGCAAGCTATCGGA
ATTGGTTTGCGAAACCAAATTAACTGGACGATTGGGTCGCGGCAAGGTCT
TCAACAATGTGGACAGCGAGTTCAGATCCATTTGCGTGGTGGGCGTTGGT
CTCGAAGGCATAGCCTTTAATGAACTGGAAATGCTGGACGAGGGTATGGA
GAATGTGCGCATAGCTGCTGGAATCGGTGCCCGATCATTACAAAGTATTG
GCTGCTCGGAAGTGCATGTGGATAATATGGACTATGCCGAACAGGCAGCC
GAAGGTGCTGCACTGGCCATTTGGCGATATGAGGAGAATCTGGCGAAGAA
GTATCGTAGCACTATACCGAAACTGGAGCTGCATGGTTCACCGGATGTCG
AGTCCTGGACAAGGGGCCTCTTCAAGGCAGAGGCACAGAATTTGGCCAGA
AGACTGTGTGATGCCCCAGCCAATTGTATGACACCGACAATTGTGGCACA
GGCTGCAGTGGATTCACTATGCCCATGCGGCATCACCGTAGAGGTTCGCA
CCATGGAATGGATTGAACAGCAACATCTGAACTCCTTCCTGATGATTGCC
AAAGGCAGTTGCGAACCACCCGTTCTCCTTGAGGTGGCCTATTGCGGCAC
CGCACCGGAAGATAAGCCCATTCTGCTGGTGGGTCAAGGCATAACCTTCA
ATTCAGTGGCATCATCTGCGTCTTTGCAAGGGCATGGATGAATTCGCGGA
GATCTCACTGGAGCGGCATGCATTTTGGCCGCATGCGCGCAGCAGCTGCT
CTATTCTTTGCCCATCATTATACTGCTGTGATACACTGGTGCGAGAATCT
GCGTCTTGGATTTCTGCAAGCTGGCGATGTGGGTGACTTACTTCATCAGT
CTCTGGCGGGTGCTAATATAAGGT
UFO02293.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| S-Lap3-RD | 2640 | CG32063-RD | 178..1301 | 9..1122 | 5080 | 97.7 | Plus |
| S-Lap3-RC | 2146 | CG32063-RC | 178..1301 | 9..1122 | 5080 | 97.7 | Plus |
| S-Lap3-RB | 2520 | CG32063-RB | 552..1675 | 9..1122 | 5080 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10466512..10467559 | 9..1052 | 4855 | 98.9 | Plus |
| 3L | 28110227 | 3L | 10491331..10492033 | 199..901 | 590 | 72.3 | Plus |
| 2R | 25286936 | 2R | 13779071..13779696 | 901..276 | 520 | 72.2 | Minus |
| 2R | 25286936 | 2R | 13597423..13597741 | 565..883 | 410 | 75.2 | Plus |
| 2R | 25286936 | 2R | 16491861..16492255 | 465..859 | 250 | 70.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:11:19 has no hits.
UFO02293.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:21:47 Download gff for
UFO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32063-RA | 368..1460 | 9..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:35 Download gff for
UFO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| S-Lap3-RB | 552..1644 | 9..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:48 Download gff for
UFO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| S-Lap3-RB | 552..1644 | 9..1095 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:48 Download gff for
UFO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10466512..10467604 | 9..1095 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:35 Download gff for
UFO02293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10459612..10460704 | 9..1095 | 98 | | Plus |
