UFO02304.5prime Sequence
1129 bp (1017 high quality bases) assembled on 2008-12-21
> UFO02304.5prime
CAGTCGACATGGACCTGAAACAGCGCACATATCTCCTGGTGACCGGTGCA
TCACGTGGAATTGGCCGTGAGTTCGCCCAGCAGTTAGCCAAACGGATCAA
AGCCGAGGGTTCCATGGTGACGCTTCTGGGACGCAATCAAACCCTTTTGC
AGGAGTCTAAGGCAGAGATTGTCGCCACAGTGCCAGATCTATCCGTGCAA
ACCTATTCGCTGGAGCTGGAAACGGCCAAAACGGAGGACTTTACCAAGAT
TCTGGAGGCATCCGGTGGAAAGAACAATTTCGAGCGAGCCATAGTCATTC
ATAATGCCGGCACAGTGGGCGATACGTCAAAGAGGGCCAAAGAAATCGGA
GATACCGACTTCCTACAGCGCTACTACCACTCCAATGTCTTCTCGGCCAT
TTCGCTAAACTGCGAGTTTATGCGCGTCTTCAAGGGAATCCCAAAGTTGG
TGGTTAATCTCAGCACCTTGGCAGCCATTGCACCTATATCCTCGATGGCA
CACTATTGCACGGTGAAGGCAGCCCGTGAGATGTACTTCCGAGTGCTGGC
CACCGAGGAGTCCGCCGAGGACACCCTGGTGTTGAACTACGCGCCCGGCG
TCATAGACACACAGATGACCGTCCAGGTTCAGCGAGAGGCCCACGATCCC
GCCGTGGTCGCCATGTTTCGAGAGCAAAGGGAGTCCAAGACCATGCTGAC
TCCCGCCCAAACGACGGAGCGATTCATCAAAGTCCTGGAAGCATTCAAGT
TCAAGTCCGGCGATCATGTGGATTACAGGGATGAGCAGTTCGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATTAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACAATAAAAAACGCCCGGCGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGTCATTACTTGGATTCTATCAACAG
AGTTCAGCGAGCTCGATATTCAATTACGCCCCGCCTGCCACTCATCGCAG
TATTGTTGTAATTCATTTAGCATTCTTGCGGACATTGAGCCATCCCAAAC
CGCATTGAATGAACTTGATTCGCAAGCGC
UFO02304.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sptr-RA | 1143 | CG12117-RA | 132..915 | 8..791 | 3920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8463524..8464307 | 791..8 | 3920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:52 has no hits.
UFO02304.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:55 Download gff for
UFO02304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 683..1479 | 1..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:16 Download gff for
UFO02304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 124..920 | 1..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:11 Download gff for
UFO02304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 124..920 | 1..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:11 Download gff for
UFO02304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8463519..8464311 | 1..798 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:16 Download gff for
UFO02304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8357552..8358344 | 1..798 | 99 | | Minus |
