UFO02309.5prime Sequence
1096 bp (985 high quality bases) assembled on 2008-12-21
> UFO02309.5prime
CAGTCGACATGAACGCATTGCGCAACATCTTCACATCGCGAACTCTCAAC
TATTTGCGCCAGAATGGACAAAACGCGATCCTCAACGCCACCCAGCAGCA
ACAAGCGGTGGACGCCGTGCCGCTAACCAACGATGCCGAGCAGCACCTAA
AATCGTCGCGTCCAGCACCGCTTTCCATACCGCGCTCCATACTCGATGCG
TGCCATTTCACGGCCAAGCAGTTTGACCTGGGAGGCTCCACGTCCGGAAA
CCAGGCGAATGGCTCTCTGTCGCCGACGACACTGAAGCGCTTCCGACGCA
TGCAACGCCGCATGGAGCTGGTGTACCGCTGCAAGCTGTGCAACACCCGC
AACACGAAGACCATCAGCGAAGAGGCCTACTACAGCGGCGTGGTGATCCT
ACAGTGCGACGGCTGTGCCGTCGACCATCTGATCAAGGACAATCTGGGAC
TGTTCACCGGCAGCGATGGCGATAGCAGCATTAGCTCTGGAATCAGTACC
AGCAAGAATATCGACCAGGTGCTGGCCGACCGGCATGCCCGCGTCCGGGT
GATCAAGGTGAACGAGCGCGGCGAGCTGATTGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAATTACGCCCCGCCCTGCCCACTCATCGCAGTACTGTT
GTAATTCATTAAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCAGCGGCATCAGCACCTTGTCGCTTGCGTATATATT
TGCCCATGTGAAACGGGGGCGAAGAAGTGTCCATATTGCCACGTTAAATC
AAACCTGTGAACCCACCCAGATGCCTGAACGAAAACATATTCTCATTACC
CGTAAGAATAGCAGCTTCACCGTTACCGCCAATCTTGCCAAATATA
UFO02309.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8206-RB | 1188 | CG8206-RB | 174..746 | 9..581 | 2865 | 100 | Plus |
| CG8206-RA | 1013 | CG8206-RA | 174..746 | 9..581 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15739403..15739975 | 9..581 | 2865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:44:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2481..2526 | 147..192 | 113 | 71.7 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 3933..3978 | 147..192 | 113 | 71.7 | Plus |
UFO02309.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:51 Download gff for
UFO02309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8206-RA | 152..730 | 1..581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:52 Download gff for
UFO02309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8206-RA | 168..746 | 1..581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:45 Download gff for
UFO02309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8206-RA | 168..746 | 1..581 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:45 Download gff for
UFO02309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15739397..15739975 | 1..581 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:52 Download gff for
UFO02309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15633430..15634008 | 1..581 | 99 | == | Plus |
