UFO02315.5prime Sequence
1149 bp (1026 high quality bases) assembled on 2008-12-21
> UFO02315.5prime
CAGTCGACATGTCGAGGCTTTTGCCCAAAATTCGCTCCTCCTCAAGTTTA
ATCCTTCTGGCTAAGAACCAAGTTGAAAAGTCCACGTCGTGTGATTACAA
TGCCCTCCTCCTTACACGCACGCAGAAGTCCACTTTCATGCCGGAGTCAT
CCGTGTTTCCTGGCGGAGTTTGCGATGCCTCGGACAGTTCGCCTGCCTGG
TTGGAACACTTTCAGAGAAACGAGTTCAGTGCCGCTAAGCTGCGGAACGT
GGGCCACGTGAAGGGTCCACGTCCGGATATTTTCCACACCAAGGCAGATA
AGAAATCGCTGGATCCATCCCTAGCTCTGCGGCTGACTGCCATACGAGAA
ACCTTCGAGGAGTTGGGTATCCTGCTGTGCAGGGACAGCAAATCATTGAC
CTCCACTAGCGATTATGGAGCGTTCTATGACCAGTTTGACCGCGCCCACT
GGCAGCACATCGTCCACAACAATGCCAGCCAGTTCCTGGAGCTCTGCAAG
CAGCTGGATGTGCTTCCAGATGTCTGGTCACTTCACGAGTGGTCTGTCTG
GCGCACGCCGTCCACGTTTAAGAAGCGCTTCGAGACGGCCTTCTTTATGA
CTGCCCTGGAACAGGAACCCAGGGTTCACATCGAACCTAATGAGGTCAAG
GATTCTGCGTGGCGTTCCCCATTGGACTACCTTCAAGCGAGCCTAAGAAA
AGAACTCTGGCTGCCGCCTCCACAATTCTATGAACTTTCGCGCTGCCTAA
ACTTCTCCTCTTTAGATAACCTGCGTCAGTTTGCAGCAGAGCGTGAGGTC
AAAGGCATTCAGCTGATTCATCCTGTAGTGCACAAGTGTACAAATGGATT
AGTGCATCTCTTGCCAGGAGATGATGCTTACCCCGCCGATCCGGATGCAA
GTAACGAAAATTGAAGATCGATTTGTCAGTCGAGGAATTCCGTTCGAGGA
CGAATGCTAAATTACATCGATCGGAGCACTGGAAACAGCATCAGTCGCAG
GCTGATATTAAGTTTGGAGCGGGATGATGTCAAGTTCATCAATGGAATCA
ACAAAGTAGCAAGCTTCTAGAACATCGTTTGGGCGGCGGGGTCAGGTTAG
GGTCATAATCATAAATCTAAGTTATAGTCATTTCGACTAGGCCTAAGAA
UFO02315.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10194-RA | 1215 | CG10194-RA | 34..1082 | 9..1055 | 4980 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19489300..19489642 | 659..317 | 1715 | 100 | Minus |
| 2L | 23513712 | 2L | 19488843..19489213 | 1029..659 | 1610 | 96.8 | Minus |
| 2L | 23513712 | 2L | 19489705..19489919 | 316..102 | 1075 | 100 | Minus |
| 2L | 23513712 | 2L | 19489978..19490071 | 102..9 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:40:28 has no hits.
UFO02315.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:47 Download gff for
UFO02315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10194-RA | 13..1054 | 9..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:06 Download gff for
UFO02315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10194-RA | 34..1075 | 9..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:09 Download gff for
UFO02315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10194-RA | 34..1075 | 9..1049 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:09 Download gff for
UFO02315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19488822..19489212 | 660..1049 | 96 | <- | Minus |
| 2L | 19489300..19489642 | 317..659 | 100 | <- | Minus |
| 2L | 19489705..19489919 | 102..316 | 100 | <- | Minus |
| 2L | 19489979..19490071 | 9..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:06 Download gff for
UFO02315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19488822..19489212 | 660..1049 | 96 | <- | Minus |
| arm_2L | 19489300..19489642 | 317..659 | 100 | <- | Minus |
| arm_2L | 19489705..19489919 | 102..316 | 100 | <- | Minus |
| arm_2L | 19489979..19490071 | 9..101 | 100 | | Minus |
