UFO02322.5prime Sequence
1099 bp (1002 high quality bases) assembled on 2008-12-21
> UFO02322.5prime
CAGTCGACATGTCGCTCCGTGTGATGTCCCCCGCTATGCTGAATGCCTGG
AGCCAGACCCTCGTGAGGGCCATGTCCACCCAGGGCGGAGCCAAGAACAT
CGGCTTCGTGGGTCTGGGCAACATGGGTGCCAACATGGCCAGCAATCTAA
TCAAGGCCGGCCACAAGCTGCATGTCTTCGATATCTCCAAGCCCGCCTGC
GATGGTCTGGCCGCCAAGGGAGCCACCGTCTACGCCAAGACCTCGGAGCT
GGCCAAGAACTCGGACTTTGTGATCACCATGCTGCCGAACAATGCCATTG
TGGATGCCTCCTACGATGAGATGACTGCCGATGGCGTCAACAAGGACACC
ATCTTCATTGACTCGTCGACGATCTCGCCGGATTTGGTCAAGTCGTTGCA
GAAGAAGATCAGCGCCAAGGGAGCTCGGTTTATCGATGCCCCCGTTTCCG
GCGGAGTTCCCGGCGCCGAGCAGGCCACCCTCACCTTCATGGTGGGCGGC
ACCGAGGCGGAGTACAATGCCGTCAAGGCCGTCCTAGAGTGCATGGGCAA
GAAGATCACCCACTGCGGCGTCTATGGCATGGGCCAGGCCGCCAAGCTGT
GCAACAACATGATGCTGGCCATCTCGATGATCGGTGTTTCGGAGGCCATG
AATCTGGCGGTGCGCCAGGGTCTCGATGCCAATGTCTTCGCCGAGATCAT
CAACTCCTCCACCGGACGCTGCTGGGCCTCGGAGATCTACAACCCTGTGC
CCGGAGTCTGCCCCAGTGCCCCAGCCAACAGGGACTACGCCGGCGGTTTC
TCCTCGGCTCTGATCACCAAGGATCTGGGTCTGGCCTCCGGAGTGGCCAA
CGCTTCCAACTCACCCATCCCGCTGGGATCTCTGGCGCACAAGTCTACCA
GTCGCTGTGCGATAAGGTCTGGGCAACAGACTTCTCCGTGGTGTACGACC
TGATGAAGAAGAGAGTTCAGCGTTGCCAGCTTCTAGACCATCGTTTGCGC
GCGGTCCAAGTAAGTGTCTATCATAATCATATCATATCATATCCACTAGC
CTAGAGATCTGTCATGACTAGTCTTGGATCTCAACAATAAAACCGCCTG
UFO02322.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15093-RE | 1255 | CG15093-RE | 97..1071 | 6..974 | 4735 | 99.4 | Plus |
| CG15093-RA | 1310 | CG15093-RA | 152..1126 | 6..974 | 4735 | 99.4 | Plus |
| CG15093-RB | 1243 | CG15093-RB | 85..1059 | 6..974 | 4735 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18775868..18776827 | 961..6 | 4635 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:17:00 has no hits.
UFO02322.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:50 Download gff for
UFO02322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15093-RA | 127..1108 | 1..979 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:35 Download gff for
UFO02322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15093-RB | 80..1062 | 1..979 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:45 Download gff for
UFO02322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15093-RB | 80..1062 | 1..979 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:45 Download gff for
UFO02322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18775868..18776829 | 1..961 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:35 Download gff for
UFO02322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14663373..14664334 | 1..961 | 99 | | Minus |
