UFO02325.5prime Sequence
1137 bp (997 high quality bases) assembled on 2008-12-21
> UFO02325.5prime
CAGTCGACATGCCGTACGCCAACCAGCCGTCCGTGCAGATAACCGAGCTG
ACGGACGACAACGTAAAGTTCGTCCTGGAGGACACGGAACTGAGTGTGGC
CAACAGCCTGCGGCGAGTGTTCATCGCGGAGACGCCGACGCTGGCCATCG
ACTGGGTGCAACTGGAAGCCAACTCTACGGTGCTCTCGGATGAGTTTTTA
GCCCACCGGATCGGTCTGATACCGCTGATCTCCGACGACGTCGTGGAGCG
GCTGCAGTACACGCGTGACTGTATCTGCCTGGACTTCTGCCCCGAATGCA
GCGTGGAGTTCACCCTGGACGTAAAGTGCAGCGAGGAACAGACGCGCCAC
GTGACCACCGCCGATCTCAAGTCGAGCAATGCCAAGGTCCTGCCGGTGAC
GTCCCGCAACCAGGGTGAGGAGGACAACGAGTACGGCGAGAGCAACGATG
AGATCCTCATAATTAAGCTGCGCAAGGGGCAGGAGCTGAAGCTGCGCGCC
TACGCCAAGAAGGGATTTGGCAAGGAGCACGCCAAGTGGAATCCTACCGC
AGGCGTGTGCTTCGAGTATGATCCGGACAACTCCATGCGACACACTCTGT
ATCCCAAACCTGATGAGTGGCCAAAGAGCGAGCACACCGAACTGGAGGAC
GACCAGTACGAGGCGCCCTACAACTGGGAAGCCAAGCCAAACAAGTTCTT
CTTCAACGTCGAATCCGCCGGTGCCCTTAAGCCTGAGAACATTGTGGTCA
TGGGTGTGCAGGTGCTGAAGAACAAGCTGTCAAACCTGCAGACGCAACTC
AGCCACGAGTCCCAAAACGATGCATTGGCGTTGCAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGAAGATCCTGGTCATGACTAGTGCTTGG
AATCCTCACAATTAAAAACCGCCCGCGGCAACCGGAGCGTTTCTGACATT
CAGATGGAGTTCTGAGGTCATTACTGGATCTATTCACAGGAGTCAAGCGA
GCTCGATTCAATACCGCCCGCCCTGCCACTCATTGCAGTACTGGTTGAAT
TCATTAAGCAATTCTGGCGCAAACTTGAAGCATACAA
UFO02325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpII33-RA | 970 | CG7885-RA | 88..908 | 9..829 | 4105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13833424..13834244 | 9..829 | 4105 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:48 has no hits.
UFO02325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:36 Download gff for
UFO02325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpII33-RA | 81..910 | 1..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:15 Download gff for
UFO02325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpII33-RA | 83..912 | 1..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:08 Download gff for
UFO02325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpII33-RA | 83..912 | 1..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:08 Download gff for
UFO02325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13833419..13834248 | 1..832 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:15 Download gff for
UFO02325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13833419..13834248 | 1..832 | 99 | == | Plus |
