UFO02327.5prime Sequence
1109 bp (1020 high quality bases) assembled on 2008-12-21
> UFO02327.5prime
CAGTCGACATGTCTATGTGGCGCAGTATTGGAACGAAAACCCAAAATCGA
GTAATACCCAGCTTTGCGAGCGTGGTCTGCCATCGCGCTTTCGCAAAGGA
CCACAATCCATCTCCAAAGTGCAGTGACAGTTCTGGAAAGGGTTGCGGTA
ATTTTACCGCTTGTGGAGACCCCCGGTTCGCGAAGAAACCACCGCCGAAG
AAGGAGGACGGCTTCCAGTTCCATCATCTGGTGAAGCAGCCGCCGGAGTG
CTGCACCGATCCCTGCGCGGAACGGTTCCCCCCGTACGACCAATGCTACT
ACAAGATCTCTGACAAGGCCACGCGCAAGTACCAGGTCACCTGGGTGGAG
TGTCCGCCCATAAAGATAAAGCCCAAGAAGATCTGCTGCTACGAGGCGGG
AATTCGTCCGCCGATCCCAAGGCGCAAGCGCAAGAAGTTCGTGACATCCG
CCGAGTGTCCCACGAATGTCGAATGCCCCACGGAGGGAGGACCCTGCCCT
AGAATCAAGATGCCCGGCTGTAAGGCCGTAGACAGCGTCTCTTGCCACGT
CGTTAGACGTAAGACCGACTGCGTCAAAGTCAAGGCCCCCTATCCTTCCT
TCTCCGAGTGCAGCCGCTCTCGTCTTCGCAAGCCTCGGGGCGTTGAATGC
AACTGCCTAGATGTTCCAAGCTCCTGTGACCTGATTCGTGAGCTGAAGAA
GTTCGAAGGAAATCCACGGAAGCCAAACTGCGGGGGCAGTAGGGCTGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
CAGGAGTCAGCGAGCTCGATATCAAATACGCCCGCCTGCCACTCATCGCA
GTACTGTTGTATCATAGCATCTGGCGAAATGAGCATCACAAACGGCATGA
TGACTGAAATCGCAGCGCATCACAACCTGGTCGCTGCTATAATATTTGCG
ATGGTGACG
UFO02327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-RA | 1070 | CG8701-RA | 179..917 | 8..746 | 3695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8371251..8371989 | 8..746 | 3695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:58:54 has no hits.
UFO02327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:24:35 Download gff for
UFO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 175..922 | 1..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:50 Download gff for
UFO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 175..922 | 1..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:45 Download gff for
UFO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 175..922 | 1..754 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:45 Download gff for
UFO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8371247..8371994 | 1..754 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:50 Download gff for
UFO02327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4258752..4259499 | 1..754 | 99 | == | Plus |
